Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.87■□□□□ 0.61
BMP4P12644 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.87■□□□□ 0.61
BMP4P12644 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 AC018445.3-201ENST00000624177 1945 ntBASIC18.87■□□□□ 0.61
BMP4P12644 AC068587.7-201ENST00000641602 218 ntBASIC18.87■□□□□ 0.61
BMP4P12644 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
BMP4P12644 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.86■□□□□ 0.61
BMP4P12644 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BMP4P12644 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BMP4P12644 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.86■□□□□ 0.61
BMP4P12644 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.86■□□□□ 0.61
BMP4P12644 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.86■□□□□ 0.61
BMP4P12644 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 SMG8-203ENST00000578922 2178 ntBASIC18.86■□□□□ 0.61
BMP4P12644 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.86■□□□□ 0.61
BMP4P12644 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BMP4P12644 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
BMP4P12644 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BMP4P12644 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BMP4P12644 OXCT2P1-201ENST00000447263 1535 ntBASIC18.85■□□□□ 0.61
BMP4P12644 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.85■□□□□ 0.61
BMP4P12644 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.85■□□□□ 0.61
BMP4P12644 AC123595.1-201ENST00000440769 1046 ntBASIC18.85■□□□□ 0.61
BMP4P12644 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
BMP4P12644 AC087239.1-201ENST00000622671 572 ntBASIC18.85■□□□□ 0.61
BMP4P12644 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.85■□□□□ 0.61
BMP4P12644 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.85■□□□□ 0.61
BMP4P12644 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BMP4P12644 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BMP4P12644 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BMP4P12644 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.84■□□□□ 0.61
BMP4P12644 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.84■□□□□ 0.61
BMP4P12644 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BMP4P12644 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 AC027612.3-201ENST00000413684 1047 ntBASIC18.84■□□□□ 0.61
BMP4P12644 AL162430.1-201ENST00000480705 870 ntBASIC18.84■□□□□ 0.61
BMP4P12644 AC012414.1-201ENST00000556676 535 ntBASIC18.84■□□□□ 0.61
BMP4P12644 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.84■□□□□ 0.61
BMP4P12644 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.84■□□□□ 0.61
BMP4P12644 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.84■□□□□ 0.61
BMP4P12644 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
BMP4P12644 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 AC098818.2-201ENST00000564925 2320 ntBASIC18.84■□□□□ 0.61
BMP4P12644 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BMP4P12644 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BMP4P12644 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BMP4P12644 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP4P12644 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP4P12644 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.83■□□□□ 0.61
BMP4P12644 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.83■□□□□ 0.61
BMP4P12644 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP4P12644 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
BMP4P12644 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP4P12644 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
BMP4P12644 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BMP4P12644 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP4P12644 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.83■□□□□ 0.6
BMP4P12644 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BMP4P12644 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP4P12644 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP4P12644 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BMP4P12644 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP4P12644 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BMP4P12644 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms