Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.1■□□□□ 0.49
UBCP0CG48 AP001330.3-201ENST00000520123 633 ntBASIC18.1■□□□□ 0.49
UBCP0CG48 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.1■□□□□ 0.49
UBCP0CG48 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.1■□□□□ 0.49
UBCP0CG48 AC053503.5-201ENST00000601508 636 ntBASIC18.1■□□□□ 0.49
UBCP0CG48 AC106739.1-201ENST00000617035 715 ntBASIC18.1■□□□□ 0.49
UBCP0CG48 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBCP0CG48 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBCP0CG48 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBCP0CG48 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.1■□□□□ 0.49
UBCP0CG48 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBCP0CG48 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.1■□□□□ 0.49
UBCP0CG48 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBCP0CG48 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
UBCP0CG48 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.09■□□□□ 0.49
UBCP0CG48 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 RASA4CP-201ENST00000424092 1398 ntBASIC18.09■□□□□ 0.49
UBCP0CG48 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.09■□□□□ 0.49
UBCP0CG48 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBCP0CG48 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.09■□□□□ 0.49
UBCP0CG48 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBCP0CG48 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBCP0CG48 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBCP0CG48 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.08■□□□□ 0.49
UBCP0CG48 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBCP0CG48 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBCP0CG48 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
UBCP0CG48 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.08■□□□□ 0.49
UBCP0CG48 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.08■□□□□ 0.49
UBCP0CG48 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBCP0CG48 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBCP0CG48 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.08■□□□□ 0.48
UBCP0CG48 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.08■□□□□ 0.48
UBCP0CG48 EEF1DP3-203ENST00000566025 782 ntBASIC18.08■□□□□ 0.48
UBCP0CG48 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.08■□□□□ 0.48
UBCP0CG48 AL355001.2-201ENST00000620617 1191 ntBASIC18.08■□□□□ 0.48
UBCP0CG48 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UBCP0CG48 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UBCP0CG48 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBCP0CG48 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.08■□□□□ 0.48
UBCP0CG48 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
UBCP0CG48 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBCP0CG48 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBCP0CG48 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBCP0CG48 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.08■□□□□ 0.48
UBCP0CG48 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.07■□□□□ 0.48
UBCP0CG48 AP004607.4-201ENST00000530158 1459 ntBASIC18.07■□□□□ 0.48
UBCP0CG48 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.07■□□□□ 0.48
UBCP0CG48 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
UBCP0CG48 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UBCP0CG48 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
UBCP0CG48 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBCP0CG48 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.07■□□□□ 0.48
UBCP0CG48 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
UBCP0CG48 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBCP0CG48 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBCP0CG48 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
UBCP0CG48 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBCP0CG48 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBCP0CG48 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.06■□□□□ 0.48
UBCP0CG48 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBCP0CG48 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.06■□□□□ 0.48
UBCP0CG48 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.06■□□□□ 0.48
UBCP0CG48 AC091305.1-201ENST00000479476 895 ntBASIC18.06■□□□□ 0.48
UBCP0CG48 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
UBCP0CG48 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.06■□□□□ 0.48
UBCP0CG48 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 AC027702.1-201ENST00000563810 1770 ntBASIC18.06■□□□□ 0.48
UBCP0CG48 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
UBCP0CG48 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBCP0CG48 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBCP0CG48 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.05■□□□□ 0.48
UBCP0CG48 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.05■□□□□ 0.48
UBCP0CG48 MIR939-201ENST00000401314 82 ntBASIC18.05■□□□□ 0.48
UBCP0CG48 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.05■□□□□ 0.48
UBCP0CG48 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.05■□□□□ 0.48
UBCP0CG48 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.05■□□□□ 0.48
UBCP0CG48 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms