Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21■□□□□ 0.95
HLA-DQB2P05538 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DQB2P05538 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB2P05538 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21■□□□□ 0.95
HLA-DQB2P05538 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DQB2P05538 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
HLA-DQB2P05538 BID-214ENST00000617586 542 ntTSL 5 BASIC21■□□□□ 0.95
HLA-DQB2P05538 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DQB2P05538 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 DUX4L16-201ENST00000555130 1264 ntBASIC20.99■□□□□ 0.95
HLA-DQB2P05538 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 AC116050.2-201ENST00000612102 1779 ntBASIC20.99■□□□□ 0.95
HLA-DQB2P05538 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HLA-DQB2P05538 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DQB2P05538 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 CNN2P6-201ENST00000439038 900 ntBASIC20.97■□□□□ 0.95
HLA-DQB2P05538 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 AC013268.1-206ENST00000638368 961 ntBASIC20.97■□□□□ 0.95
HLA-DQB2P05538 AC112229.1-201ENST00000639295 961 ntBASIC20.97■□□□□ 0.95
HLA-DQB2P05538 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.97■□□□□ 0.95
HLA-DQB2P05538 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DQB2P05538 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 PKD1P6-201ENST00000343738 4769 ntBASIC20.96■□□□□ 0.95
HLA-DQB2P05538 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DQB2P05538 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 AC004911.1-201ENST00000416316 871 ntBASIC20.95■□□□□ 0.94
HLA-DQB2P05538 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 AC007322.3-201ENST00000426526 701 ntBASIC20.95■□□□□ 0.94
HLA-DQB2P05538 AC007322.4-201ENST00000509611 723 ntBASIC20.95■□□□□ 0.94
HLA-DQB2P05538 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.95■□□□□ 0.94
HLA-DQB2P05538 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms