Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT6AP02538 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT6AP02538 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT6AP02538 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT6AP02538 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT6AP02538 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 AC011484.1-201ENST00000377652 1995 ntBASIC19.98■□□□□ 0.79
KRT6AP02538 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT6AP02538 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT6AP02538 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KRT6AP02538 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT6AP02538 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT6AP02538 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRT6AP02538 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT6AP02538 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRT6AP02538 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT6AP02538 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 KRT16P2-201ENST00000414673 1423 ntBASIC19.97■□□□□ 0.79
KRT6AP02538 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT6AP02538 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT6AP02538 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
KRT6AP02538 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT6AP02538 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 AC007225.1-201ENST00000566331 1836 ntBASIC19.97■□□□□ 0.79
KRT6AP02538 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT6AP02538 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT6AP02538 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 AC123595.1-201ENST00000440769 1046 ntBASIC19.96■□□□□ 0.79
KRT6AP02538 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.96■□□□□ 0.79
KRT6AP02538 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT6AP02538 GABARAPL3-202ENST00000624044 1851 ntBASIC19.96■□□□□ 0.79
KRT6AP02538 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT6AP02538 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT6AP02538 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT6AP02538 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
KRT6AP02538 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT6AP02538 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRT6AP02538 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.95■□□□□ 0.78
KRT6AP02538 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 AC010141.2-201ENST00000452426 721 ntBASIC19.95■□□□□ 0.78
KRT6AP02538 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
KRT6AP02538 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
KRT6AP02538 AP005212.1-201ENST00000581547 1997 ntBASIC19.95■□□□□ 0.78
KRT6AP02538 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT6AP02538 AC073130.3-201ENST00000624389 2278 ntBASIC19.95■□□□□ 0.78
KRT6AP02538 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT6AP02538 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT6AP02538 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
KRT6AP02538 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 AC245052.3-201ENST00000450182 901 ntBASIC19.94■□□□□ 0.78
KRT6AP02538 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6AP02538 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT6AP02538 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT6AP02538 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT6AP02538 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms