Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
ALDH1A1P00352 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 AC139530.1-201ENST00000575312 1977 ntBASIC23.87■■□□□ 1.41
ALDH1A1P00352 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ALDH1A1P00352 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 AL355355.2-201ENST00000442321 338 ntBASIC23.86■■□□□ 1.41
ALDH1A1P00352 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ALDH1A1P00352 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.86■■□□□ 1.41
ALDH1A1P00352 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ALDH1A1P00352 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.85■■□□□ 1.41
ALDH1A1P00352 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ALDH1A1P00352 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ALDH1A1P00352 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ALDH1A1P00352 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.85■■□□□ 1.41
ALDH1A1P00352 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.85■■□□□ 1.41
ALDH1A1P00352 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ALDH1A1P00352 AC087742.1-201ENST00000575880 1738 ntBASIC23.84■■□□□ 1.41
ALDH1A1P00352 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ALDH1A1P00352 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ALDH1A1P00352 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ALDH1A1P00352 AC005363.2-201ENST00000618631 242 ntBASIC23.84■■□□□ 1.41
ALDH1A1P00352 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ALDH1A1P00352 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.84■■□□□ 1.41
ALDH1A1P00352 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ALDH1A1P00352 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ALDH1A1P00352 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.83■■□□□ 1.41
ALDH1A1P00352 AC145285.6-201ENST00000604632 637 ntBASIC23.83■■□□□ 1.41
ALDH1A1P00352 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.83■■□□□ 1.41
ALDH1A1P00352 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
ALDH1A1P00352 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.82■■□□□ 1.4
ALDH1A1P00352 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.82■■□□□ 1.4
ALDH1A1P00352 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.82■■□□□ 1.4
ALDH1A1P00352 AL390719.1-204ENST00000412397 1219 ntBASIC23.82■■□□□ 1.4
ALDH1A1P00352 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.82■■□□□ 1.4
ALDH1A1P00352 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.82■■□□□ 1.4
ALDH1A1P00352 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ALDH1A1P00352 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.81■■□□□ 1.4
ALDH1A1P00352 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 AC006557.6-201ENST00000623071 864 ntBASIC23.81■■□□□ 1.4
ALDH1A1P00352 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ALDH1A1P00352 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.81■■□□□ 1.4
ALDH1A1P00352 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.8■■□□□ 1.4
ALDH1A1P00352 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ALDH1A1P00352 C11orf96-202ENST00000528572 1834 ntBASIC23.8■■□□□ 1.4
ALDH1A1P00352 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ALDH1A1P00352 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms