Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.73■□□□□ 0.59
CLPXO76031 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.73■□□□□ 0.59
CLPXO76031 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CLPXO76031 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.72■□□□□ 0.59
CLPXO76031 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLPXO76031 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLPXO76031 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.72■□□□□ 0.59
CLPXO76031 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.72■□□□□ 0.59
CLPXO76031 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.72■□□□□ 0.59
CLPXO76031 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
CLPXO76031 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.72■□□□□ 0.59
CLPXO76031 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPXO76031 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.72■□□□□ 0.59
CLPXO76031 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
CLPXO76031 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 FP325331.1-202ENST00000623531 1380 ntBASIC18.71■□□□□ 0.59
CLPXO76031 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPXO76031 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPXO76031 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.71■□□□□ 0.58
CLPXO76031 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLPXO76031 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.7■□□□□ 0.58
CLPXO76031 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
CLPXO76031 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPXO76031 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPXO76031 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPXO76031 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLPXO76031 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 AC099778.1-201ENST00000568593 1911 ntBASIC18.69■□□□□ 0.58
CLPXO76031 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPXO76031 AC010997.5-201ENST00000609182 354 ntBASIC18.69■□□□□ 0.58
CLPXO76031 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPXO76031 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPXO76031 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLPXO76031 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPXO76031 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPXO76031 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 AL512408.1-201ENST00000569378 2000 ntBASIC18.68■□□□□ 0.58
CLPXO76031 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.68■□□□□ 0.58
CLPXO76031 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.68■□□□□ 0.58
CLPXO76031 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLPXO76031 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLPXO76031 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLPXO76031 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPXO76031 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 AC005082.1-201ENST00000413042 2259 ntBASIC18.67■□□□□ 0.58
CLPXO76031 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms