Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PMPCBO75439 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.99■□□□□ 0.95
PMPCBO75439 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PMPCBO75439 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.99■□□□□ 0.95
PMPCBO75439 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PMPCBO75439 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.99■□□□□ 0.95
PMPCBO75439 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PMPCBO75439 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMPCBO75439 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.98■□□□□ 0.95
PMPCBO75439 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.98■□□□□ 0.95
PMPCBO75439 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.98■□□□□ 0.95
PMPCBO75439 SLC7A5P1-201ENST00000568957 537 ntBASIC20.98■□□□□ 0.95
PMPCBO75439 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.98■□□□□ 0.95
PMPCBO75439 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.98■□□□□ 0.95
PMPCBO75439 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.98■□□□□ 0.95
PMPCBO75439 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMPCBO75439 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.98■□□□□ 0.95
PMPCBO75439 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.97■□□□□ 0.95
PMPCBO75439 AC006128.1-201ENST00000624704 1661 ntBASIC20.97■□□□□ 0.95
PMPCBO75439 AC016769.1-201ENST00000409132 1010 ntBASIC20.97■□□□□ 0.95
PMPCBO75439 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.97■□□□□ 0.95
PMPCBO75439 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PMPCBO75439 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PMPCBO75439 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
PMPCBO75439 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.97■□□□□ 0.95
PMPCBO75439 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMPCBO75439 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 RBM17P2-201ENST00000616397 1405 ntBASIC20.96■□□□□ 0.95
PMPCBO75439 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.96■□□□□ 0.95
PMPCBO75439 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.96■□□□□ 0.95
PMPCBO75439 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMPCBO75439 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PMPCBO75439 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PMPCBO75439 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
PMPCBO75439 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.95■□□□□ 0.94
PMPCBO75439 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PMPCBO75439 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.95■□□□□ 0.94
PMPCBO75439 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.95■□□□□ 0.94
PMPCBO75439 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.95■□□□□ 0.94
PMPCBO75439 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PMPCBO75439 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.94■□□□□ 0.94
PMPCBO75439 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.94■□□□□ 0.94
PMPCBO75439 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PMPCBO75439 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PMPCBO75439 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.94■□□□□ 0.94
PMPCBO75439 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.94■□□□□ 0.94
PMPCBO75439 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PMPCBO75439 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.94■□□□□ 0.94
PMPCBO75439 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.94■□□□□ 0.94
PMPCBO75439 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PMPCBO75439 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms