Protein–RNA interactions for Protein: O75030

MITF, Microphthalmia-associated transcription factor, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MITFO75030 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MITFO75030 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
MITFO75030 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19■□□□□ 0.63
MITFO75030 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19■□□□□ 0.63
MITFO75030 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
MITFO75030 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MITFO75030 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.99■□□□□ 0.63
MITFO75030 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.99■□□□□ 0.63
MITFO75030 SMUG1P1-201ENST00000590640 811 ntBASIC18.99■□□□□ 0.63
MITFO75030 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
MITFO75030 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.99■□□□□ 0.63
MITFO75030 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
MITFO75030 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MITFO75030 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 SMG8-203ENST00000578922 2178 ntBASIC18.98■□□□□ 0.63
MITFO75030 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.98■□□□□ 0.63
MITFO75030 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 SERBP1P1-201ENST00000396021 1160 ntBASIC18.98■□□□□ 0.63
MITFO75030 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.98■□□□□ 0.63
MITFO75030 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MITFO75030 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MITFO75030 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MITFO75030 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.97■□□□□ 0.63
MITFO75030 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 BX005040.4-201ENST00000637145 1518 ntBASIC18.97■□□□□ 0.63
MITFO75030 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MITFO75030 AC092171.4-201ENST00000609130 632 ntBASIC18.97■□□□□ 0.63
MITFO75030 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.97■□□□□ 0.63
MITFO75030 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MITFO75030 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.96■□□□□ 0.63
MITFO75030 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 MIR3621-201ENST00000580529 85 ntBASIC18.96■□□□□ 0.63
MITFO75030 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 AC116562.4-201ENST00000641316 2276 ntBASIC18.96■□□□□ 0.63
MITFO75030 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 SYT6-210ENST00000641643 1587 ntBASIC18.96■□□□□ 0.63
MITFO75030 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 TCF3P1-201ENST00000423021 1937 ntBASIC18.96■□□□□ 0.63
MITFO75030 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.96■□□□□ 0.63
MITFO75030 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MITFO75030 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms