Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN2BO60939 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SCN2BO60939 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCN2BO60939 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN2BO60939 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SCN2BO60939 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SCN2BO60939 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.6■□□□□ 0.73
SCN2BO60939 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN2BO60939 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SCN2BO60939 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN2BO60939 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN2BO60939 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN2BO60939 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN2BO60939 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN2BO60939 MIR6084-201ENST00000622012 110 ntBASIC19.59■□□□□ 0.73
SCN2BO60939 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN2BO60939 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN2BO60939 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
SCN2BO60939 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCN2BO60939 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN2BO60939 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN2BO60939 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN2BO60939 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN2BO60939 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN2BO60939 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN2BO60939 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SCN2BO60939 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN2BO60939 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN2BO60939 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
SCN2BO60939 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.58■□□□□ 0.72
SCN2BO60939 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SCN2BO60939 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.58■□□□□ 0.72
SCN2BO60939 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SCN2BO60939 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN2BO60939 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN2BO60939 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SCN2BO60939 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN2BO60939 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SCN2BO60939 AC020907.5-201ENST00000624372 1936 ntBASIC19.57■□□□□ 0.72
SCN2BO60939 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN2BO60939 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN2BO60939 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN2BO60939 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN2BO60939 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN2BO60939 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.57■□□□□ 0.72
SCN2BO60939 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCN2BO60939 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.57■□□□□ 0.72
SCN2BO60939 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN2BO60939 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.57■□□□□ 0.72
SCN2BO60939 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SCN2BO60939 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.57■□□□□ 0.72
SCN2BO60939 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
SCN2BO60939 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCN2BO60939 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SCN2BO60939 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SCN2BO60939 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.56■□□□□ 0.72
SCN2BO60939 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 AC142381.2-201ENST00000566120 298 ntBASIC19.56■□□□□ 0.72
SCN2BO60939 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN2BO60939 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SCN2BO60939 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCN2BO60939 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SCN2BO60939 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SCN2BO60939 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN2BO60939 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN2BO60939 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SCN2BO60939 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN2BO60939 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN2BO60939 KRT87P-202ENST00000534226 1464 ntBASIC19.55■□□□□ 0.72
SCN2BO60939 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN2BO60939 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms