Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.55■□□□□ 0.56
PFDN1O60925 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.55■□□□□ 0.56
PFDN1O60925 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PFDN1O60925 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.55■□□□□ 0.56
PFDN1O60925 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.55■□□□□ 0.56
PFDN1O60925 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 AL353803.4-201ENST00000565882 1934 ntBASIC18.55■□□□□ 0.56
PFDN1O60925 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PFDN1O60925 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PFDN1O60925 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
PFDN1O60925 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PFDN1O60925 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.54■□□□□ 0.56
PFDN1O60925 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PFDN1O60925 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PFDN1O60925 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.53■□□□□ 0.56
PFDN1O60925 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PFDN1O60925 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
PFDN1O60925 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PFDN1O60925 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PFDN1O60925 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PFDN1O60925 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.52■□□□□ 0.56
PFDN1O60925 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PFDN1O60925 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PFDN1O60925 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.52■□□□□ 0.56
PFDN1O60925 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.52■□□□□ 0.56
PFDN1O60925 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.52■□□□□ 0.55
PFDN1O60925 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PFDN1O60925 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 AL359258.2-201ENST00000564063 1566 ntBASIC18.51■□□□□ 0.55
PFDN1O60925 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PFDN1O60925 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.51■□□□□ 0.55
PFDN1O60925 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PFDN1O60925 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 OR6D1P-202ENST00000641007 5290 ntBASIC18.5■□□□□ 0.55
PFDN1O60925 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms