Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TSPAN3O60637 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN3O60637 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN3O60637 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN3O60637 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TSPAN3O60637 AC069152.1-201ENST00000438030 544 ntBASIC21.34■■□□□ 1.01
TSPAN3O60637 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.34■■□□□ 1.01
TSPAN3O60637 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.34■■□□□ 1.01
TSPAN3O60637 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN3O60637 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN3O60637 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN3O60637 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
TSPAN3O60637 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.34■■□□□ 1.01
TSPAN3O60637 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN3O60637 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN3O60637 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN3O60637 AC007322.3-201ENST00000426526 701 ntBASIC21.33■■□□□ 1.01
TSPAN3O60637 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.33■■□□□ 1.01
TSPAN3O60637 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.33■■□□□ 1.01
TSPAN3O60637 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.33■■□□□ 1.01
TSPAN3O60637 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.33■■□□□ 1.01
TSPAN3O60637 MIR4758-201ENST00000577688 71 ntBASIC21.33■■□□□ 1.01
TSPAN3O60637 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
TSPAN3O60637 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN3O60637 FAM21FP-204ENST00000608637 956 ntBASIC21.33■■□□□ 1.01
TSPAN3O60637 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TSPAN3O60637 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TSPAN3O60637 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.33■■□□□ 1
TSPAN3O60637 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TSPAN3O60637 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TSPAN3O60637 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.32■■□□□ 1
TSPAN3O60637 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TSPAN3O60637 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.32■■□□□ 1
TSPAN3O60637 AC133041.1-202ENST00000642053 222 ntBASIC21.32■■□□□ 1
TSPAN3O60637 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.32■■□□□ 1
TSPAN3O60637 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN3O60637 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TSPAN3O60637 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.31■■□□□ 1
TSPAN3O60637 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.31■■□□□ 1
TSPAN3O60637 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.31■■□□□ 1
TSPAN3O60637 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.31■■□□□ 1
TSPAN3O60637 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TSPAN3O60637 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.31■■□□□ 1
TSPAN3O60637 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN3O60637 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.3■■□□□ 1
TSPAN3O60637 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.3■■□□□ 1
TSPAN3O60637 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.3■■□□□ 1
TSPAN3O60637 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN3O60637 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TSPAN3O60637 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TSPAN3O60637 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.3■■□□□ 1
TSPAN3O60637 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.3■■□□□ 1
TSPAN3O60637 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN3O60637 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN3O60637 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN3O60637 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN3O60637 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.29■■□□□ 1
TSPAN3O60637 AC116050.2-201ENST00000612102 1779 ntBASIC21.29■■□□□ 1
TSPAN3O60637 ABHD17AP1-201ENST00000358206 933 ntBASIC21.29■■□□□ 1
TSPAN3O60637 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TSPAN3O60637 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN3O60637 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSPAN3O60637 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.29■■□□□ 1
TSPAN3O60637 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.29■■□□□ 1
TSPAN3O60637 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN3O60637 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TSPAN3O60637 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TSPAN3O60637 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.28■■□□□ 1
TSPAN3O60637 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TSPAN3O60637 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TSPAN3O60637 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms