Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.36■□□□□ 0.85
GFRA3O60609 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GFRA3O60609 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.36■□□□□ 0.85
GFRA3O60609 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.36■□□□□ 0.85
GFRA3O60609 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.36■□□□□ 0.85
GFRA3O60609 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.35■□□□□ 0.85
GFRA3O60609 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.35■□□□□ 0.85
GFRA3O60609 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.35■□□□□ 0.85
GFRA3O60609 AC073195.1-201ENST00000607241 877 ntBASIC20.35■□□□□ 0.85
GFRA3O60609 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.35■□□□□ 0.85
GFRA3O60609 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GFRA3O60609 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.35■□□□□ 0.85
GFRA3O60609 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GFRA3O60609 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.34■□□□□ 0.85
GFRA3O60609 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.34■□□□□ 0.85
GFRA3O60609 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.34■□□□□ 0.85
GFRA3O60609 AP000550.4-202ENST00000639755 178 ntBASIC20.34■□□□□ 0.85
GFRA3O60609 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GFRA3O60609 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GFRA3O60609 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.33■□□□□ 0.85
GFRA3O60609 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.33■□□□□ 0.85
GFRA3O60609 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GFRA3O60609 AP003733.4-201ENST00000623785 1697 ntBASIC20.33■□□□□ 0.85
GFRA3O60609 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.33■□□□□ 0.85
GFRA3O60609 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GFRA3O60609 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GFRA3O60609 AP000593.1-201ENST00000393668 712 ntBASIC20.33■□□□□ 0.85
GFRA3O60609 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.33■□□□□ 0.85
GFRA3O60609 AK4P3-201ENST00000418260 669 ntBASIC20.33■□□□□ 0.85
GFRA3O60609 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.33■□□□□ 0.85
GFRA3O60609 FITM1-202ENST00000559294 800 ntBASIC20.33■□□□□ 0.85
GFRA3O60609 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GFRA3O60609 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GFRA3O60609 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.33■□□□□ 0.84
GFRA3O60609 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GFRA3O60609 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GFRA3O60609 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GFRA3O60609 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
GFRA3O60609 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.32■□□□□ 0.84
GFRA3O60609 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GFRA3O60609 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 AC245052.3-201ENST00000450182 901 ntBASIC20.32■□□□□ 0.84
GFRA3O60609 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.32■□□□□ 0.84
GFRA3O60609 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.32■□□□□ 0.84
GFRA3O60609 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.32■□□□□ 0.84
GFRA3O60609 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.32■□□□□ 0.84
GFRA3O60609 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GFRA3O60609 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.32■□□□□ 0.84
GFRA3O60609 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFRA3O60609 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.31■□□□□ 0.84
GFRA3O60609 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFRA3O60609 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GFRA3O60609 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFRA3O60609 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.31■□□□□ 0.84
GFRA3O60609 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFRA3O60609 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.31■□□□□ 0.84
GFRA3O60609 AC005829.2-201ENST00000571422 1056 ntBASIC20.31■□□□□ 0.84
GFRA3O60609 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.31■□□□□ 0.84
GFRA3O60609 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.31■□□□□ 0.84
GFRA3O60609 AC006538.3-201ENST00000612495 578 ntBASIC20.31■□□□□ 0.84
GFRA3O60609 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
GFRA3O60609 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.31■□□□□ 0.84
GFRA3O60609 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GFRA3O60609 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GFRA3O60609 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
GFRA3O60609 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GFRA3O60609 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GFRA3O60609 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms