Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH7O60245 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH7O60245 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH7O60245 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDH7O60245 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 RARRES2P11-201ENST00000635158 484 ntBASIC19.73■□□□□ 0.75
PCDH7O60245 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH7O60245 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 AC004854.2-201ENST00000608450 1441 ntBASIC19.73■□□□□ 0.75
PCDH7O60245 AC011484.1-201ENST00000377652 1995 ntBASIC19.73■□□□□ 0.75
PCDH7O60245 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH7O60245 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH7O60245 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH7O60245 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH7O60245 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
PCDH7O60245 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
PCDH7O60245 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH7O60245 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH7O60245 SLC7A5P2-201ENST00000553010 536 ntBASIC19.72■□□□□ 0.75
PCDH7O60245 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH7O60245 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH7O60245 LINC01006-201ENST00000333319 2292 ntBASIC19.72■□□□□ 0.75
PCDH7O60245 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH7O60245 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDH7O60245 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH7O60245 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDH7O60245 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH7O60245 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDH7O60245 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDH7O60245 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH7O60245 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCDH7O60245 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH7O60245 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PCDH7O60245 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH7O60245 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH7O60245 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDH7O60245 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH7O60245 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDH7O60245 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDH7O60245 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH7O60245 AC007225.1-201ENST00000566331 1836 ntBASIC19.69■□□□□ 0.74
PCDH7O60245 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH7O60245 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH7O60245 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDH7O60245 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH7O60245 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDH7O60245 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PCDH7O60245 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH7O60245 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms