Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.64■□□□□ 0.41
SSNA1O43805 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSNA1O43805 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SSNA1O43805 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.63■□□□□ 0.41
SSNA1O43805 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.63■□□□□ 0.41
SSNA1O43805 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SSNA1O43805 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.63■□□□□ 0.41
SSNA1O43805 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.63■□□□□ 0.41
SSNA1O43805 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.63■□□□□ 0.41
SSNA1O43805 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SSNA1O43805 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.63■□□□□ 0.41
SSNA1O43805 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSNA1O43805 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
SSNA1O43805 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SSNA1O43805 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.62■□□□□ 0.41
SSNA1O43805 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SSNA1O43805 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 AL592293.1-201ENST00000502889 1188 ntBASIC17.62■□□□□ 0.41
SSNA1O43805 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.62■□□□□ 0.41
SSNA1O43805 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SSNA1O43805 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SSNA1O43805 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SSNA1O43805 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SSNA1O43805 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SSNA1O43805 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSNA1O43805 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
SSNA1O43805 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SSNA1O43805 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SSNA1O43805 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 AC022616.5-201ENST00000518796 181 ntBASIC17.61■□□□□ 0.41
SSNA1O43805 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 OR7E47P-201ENST00000546390 1422 ntBASIC17.61■□□□□ 0.41
SSNA1O43805 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSNA1O43805 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SSNA1O43805 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SSNA1O43805 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.61■□□□□ 0.41
SSNA1O43805 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SSNA1O43805 AL512408.1-201ENST00000569378 2000 ntBASIC17.6■□□□□ 0.41
SSNA1O43805 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.6■□□□□ 0.41
SSNA1O43805 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.6■□□□□ 0.41
SSNA1O43805 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 AC099778.1-201ENST00000568593 1911 ntBASIC17.6■□□□□ 0.41
SSNA1O43805 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SSNA1O43805 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.6■□□□□ 0.41
SSNA1O43805 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSNA1O43805 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.59■□□□□ 0.41
SSNA1O43805 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SSNA1O43805 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.59■□□□□ 0.41
SSNA1O43805 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SSNA1O43805 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms