Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 PKD1P6-201ENST00000343738 4769 ntBASIC18.42■□□□□ 0.54
TRAF3IP2O43734 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 AC016769.1-201ENST00000409132 1010 ntBASIC18.42■□□□□ 0.54
TRAF3IP2O43734 AC091799.1-201ENST00000422823 811 ntBASIC18.42■□□□□ 0.54
TRAF3IP2O43734 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.42■□□□□ 0.54
TRAF3IP2O43734 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF3IP2O43734 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 MFSD11-216ENST00000590393 1141 ntBASIC18.41■□□□□ 0.54
TRAF3IP2O43734 AC010536.3-201ENST00000620306 533 ntBASIC18.41■□□□□ 0.54
TRAF3IP2O43734 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAF3IP2O43734 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF3IP2O43734 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
TRAF3IP2O43734 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAF3IP2O43734 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAF3IP2O43734 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
TRAF3IP2O43734 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 AC022517.1-201ENST00000592429 346 ntBASIC18.39■□□□□ 0.53
TRAF3IP2O43734 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF3IP2O43734 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms