Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
KCNQ3O43525 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
KCNQ3O43525 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
KCNQ3O43525 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
KCNQ3O43525 AC116050.2-201ENST00000612102 1779 ntBASIC26.71■■□□□ 1.87
KCNQ3O43525 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.71■■□□□ 1.87
KCNQ3O43525 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
KCNQ3O43525 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KCNQ3O43525 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.7■■□□□ 1.87
KCNQ3O43525 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KCNQ3O43525 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.7■■□□□ 1.87
KCNQ3O43525 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KCNQ3O43525 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.7■■□□□ 1.87
KCNQ3O43525 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.7■■□□□ 1.87
KCNQ3O43525 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.7■■□□□ 1.86
KCNQ3O43525 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.7■■□□□ 1.86
KCNQ3O43525 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
KCNQ3O43525 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
KCNQ3O43525 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.7■■□□□ 1.86
KCNQ3O43525 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.7■■□□□ 1.86
KCNQ3O43525 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
KCNQ3O43525 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
KCNQ3O43525 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
KCNQ3O43525 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.69■■□□□ 1.86
KCNQ3O43525 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.69■■□□□ 1.86
KCNQ3O43525 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
KCNQ3O43525 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
KCNQ3O43525 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KCNQ3O43525 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KCNQ3O43525 AC026366.1-201ENST00000488803 879 ntBASIC26.69■■□□□ 1.86
KCNQ3O43525 AC093827.2-201ENST00000512654 315 ntBASIC26.69■■□□□ 1.86
KCNQ3O43525 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
KCNQ3O43525 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
KCNQ3O43525 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
KCNQ3O43525 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.68■■□□□ 1.86
KCNQ3O43525 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.68■■□□□ 1.86
KCNQ3O43525 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
KCNQ3O43525 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.67■■□□□ 1.86
KCNQ3O43525 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
KCNQ3O43525 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 GCSHP5-201ENST00000443090 522 ntBASIC26.67■■□□□ 1.86
KCNQ3O43525 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.67■■□□□ 1.86
KCNQ3O43525 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.67■■□□□ 1.86
KCNQ3O43525 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
KCNQ3O43525 AC073648.6-201ENST00000641589 218 ntBASIC26.67■■□□□ 1.86
KCNQ3O43525 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
KCNQ3O43525 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
KCNQ3O43525 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNQ3O43525 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNQ3O43525 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.66■■□□□ 1.86
KCNQ3O43525 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.66■■□□□ 1.86
KCNQ3O43525 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.66■■□□□ 1.86
KCNQ3O43525 AP003097.1-201ENST00000530657 1135 ntBASIC26.66■■□□□ 1.86
KCNQ3O43525 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
KCNQ3O43525 AL117328.2-201ENST00000624617 1940 ntBASIC26.66■■□□□ 1.86
KCNQ3O43525 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.66■■□□□ 1.86
KCNQ3O43525 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNQ3O43525 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
KCNQ3O43525 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.65■■□□□ 1.86
KCNQ3O43525 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.65■■□□□ 1.86
KCNQ3O43525 AC060766.5-201ENST00000590539 871 ntBASIC26.65■■□□□ 1.86
KCNQ3O43525 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNQ3O43525 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.65■■□□□ 1.86
KCNQ3O43525 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.64■■□□□ 1.86
KCNQ3O43525 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KCNQ3O43525 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.64■■□□□ 1.86
KCNQ3O43525 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
KCNQ3O43525 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KCNQ3O43525 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
KCNQ3O43525 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.64■■□□□ 1.86
KCNQ3O43525 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.64■■□□□ 1.86
KCNQ3O43525 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.64■■□□□ 1.86
KCNQ3O43525 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.64■■□□□ 1.86
KCNQ3O43525 HLA-B-256ENST00000639848 1089 ntBASIC26.64■■□□□ 1.86
KCNQ3O43525 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.64■■□□□ 1.85
KCNQ3O43525 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.64■■□□□ 1.85
KCNQ3O43525 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.64■■□□□ 1.85
KCNQ3O43525 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
KCNQ3O43525 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
KCNQ3O43525 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
KCNQ3O43525 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.64■■□□□ 1.85
KCNQ3O43525 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
KCNQ3O43525 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms