Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HTRA2O43464 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HTRA2O43464 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.89■□□□□ 0.93
HTRA2O43464 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.89■□□□□ 0.93
HTRA2O43464 AL050303.2-201ENST00000619798 666 ntBASIC20.89■□□□□ 0.93
HTRA2O43464 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.89■□□□□ 0.93
HTRA2O43464 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA2O43464 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.89■□□□□ 0.93
HTRA2O43464 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HTRA2O43464 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HTRA2O43464 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.88■□□□□ 0.93
HTRA2O43464 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA2O43464 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.88■□□□□ 0.93
HTRA2O43464 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.88■□□□□ 0.93
HTRA2O43464 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.88■□□□□ 0.93
HTRA2O43464 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HTRA2O43464 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 MIR663A-201ENST00000385250 93 ntBASIC20.87■□□□□ 0.93
HTRA2O43464 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.87■□□□□ 0.93
HTRA2O43464 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HTRA2O43464 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.87■□□□□ 0.93
HTRA2O43464 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
HTRA2O43464 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HTRA2O43464 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.86■□□□□ 0.93
HTRA2O43464 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HTRA2O43464 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 CYP2T1P-201ENST00000432607 1285 ntBASIC20.86■□□□□ 0.93
HTRA2O43464 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.86■□□□□ 0.93
HTRA2O43464 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.86■□□□□ 0.93
HTRA2O43464 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HTRA2O43464 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HTRA2O43464 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HTRA2O43464 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.85■□□□□ 0.93
HTRA2O43464 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.85■□□□□ 0.93
HTRA2O43464 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.85■□□□□ 0.93
HTRA2O43464 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTRA2O43464 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.85■□□□□ 0.93
HTRA2O43464 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.84■□□□□ 0.93
HTRA2O43464 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA2O43464 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA2O43464 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA2O43464 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.84■□□□□ 0.93
HTRA2O43464 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTRA2O43464 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
HTRA2O43464 AC006970.2-201ENST00000450065 779 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.84■□□□□ 0.93
HTRA2O43464 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.84■□□□□ 0.93
HTRA2O43464 AC133552.2-202ENST00000575694 574 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 AC016405.3-201ENST00000607710 860 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 FAM21FP-204ENST00000608637 956 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 AC116050.2-201ENST00000612102 1779 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.84■□□□□ 0.93
HTRA2O43464 AC073130.3-201ENST00000624389 2278 ntBASIC20.84■□□□□ 0.93
HTRA2O43464 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms