Protein–RNA interactions for Protein: O43414

ERI3, ERI1 exoribonuclease 3, humanhuman

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERI3O43414 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERI3O43414 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
ERI3O43414 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.71■□□□□ 0.75
ERI3O43414 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ERI3O43414 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERI3O43414 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.71■□□□□ 0.75
ERI3O43414 AC121338.2-201ENST00000622535 1744 ntBASIC19.71■□□□□ 0.75
ERI3O43414 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.71■□□□□ 0.74
ERI3O43414 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.7■□□□□ 0.74
ERI3O43414 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERI3O43414 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.7■□□□□ 0.74
ERI3O43414 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ERI3O43414 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.7■□□□□ 0.74
ERI3O43414 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
ERI3O43414 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ERI3O43414 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ERI3O43414 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERI3O43414 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERI3O43414 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.69■□□□□ 0.74
ERI3O43414 AC004911.1-201ENST00000416316 871 ntBASIC19.69■□□□□ 0.74
ERI3O43414 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.69■□□□□ 0.74
ERI3O43414 AC091799.1-201ENST00000422823 811 ntBASIC19.69■□□□□ 0.74
ERI3O43414 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.69■□□□□ 0.74
ERI3O43414 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.69■□□□□ 0.74
ERI3O43414 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.69■□□□□ 0.74
ERI3O43414 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
ERI3O43414 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.69■□□□□ 0.74
ERI3O43414 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.69■□□□□ 0.74
ERI3O43414 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ERI3O43414 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.69■□□□□ 0.74
ERI3O43414 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ERI3O43414 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERI3O43414 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ERI3O43414 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ERI3O43414 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ERI3O43414 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.68■□□□□ 0.74
ERI3O43414 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.68■□□□□ 0.74
ERI3O43414 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ERI3O43414 AC013268.1-206ENST00000638368 961 ntBASIC19.68■□□□□ 0.74
ERI3O43414 AC112229.1-201ENST00000639295 961 ntBASIC19.68■□□□□ 0.74
ERI3O43414 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERI3O43414 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.68■□□□□ 0.74
ERI3O43414 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ERI3O43414 PLK5-205ENST00000642079 1969 ntBASIC19.68■□□□□ 0.74
ERI3O43414 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
ERI3O43414 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ERI3O43414 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 AC011484.1-201ENST00000377652 1995 ntBASIC19.67■□□□□ 0.74
ERI3O43414 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.67■□□□□ 0.74
ERI3O43414 DUX4L16-201ENST00000555130 1264 ntBASIC19.67■□□□□ 0.74
ERI3O43414 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.67■□□□□ 0.74
ERI3O43414 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.67■□□□□ 0.74
ERI3O43414 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ERI3O43414 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 AC116050.2-201ENST00000612102 1779 ntBASIC19.67■□□□□ 0.74
ERI3O43414 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERI3O43414 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ERI3O43414 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.66■□□□□ 0.74
ERI3O43414 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.66■□□□□ 0.74
ERI3O43414 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.66■□□□□ 0.74
ERI3O43414 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
ERI3O43414 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ERI3O43414 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms