Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21■□□□□ 0.95
RIPK2O43353 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21■□□□□ 0.95
RIPK2O43353 SF1-220ENST00000626028 704 ntTSL 2 BASIC21■□□□□ 0.95
RIPK2O43353 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RIPK2O43353 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RIPK2O43353 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21■□□□□ 0.95
RIPK2O43353 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21■□□□□ 0.95
RIPK2O43353 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RIPK2O43353 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 AC087289.5-201ENST00000586076 3175 ntBASIC20.99■□□□□ 0.95
RIPK2O43353 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RIPK2O43353 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RIPK2O43353 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RIPK2O43353 TCF3P1-201ENST00000423021 1937 ntBASIC20.99■□□□□ 0.95
RIPK2O43353 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RIPK2O43353 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
RIPK2O43353 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.99■□□□□ 0.95
RIPK2O43353 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPK2O43353 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK2O43353 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK2O43353 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.98■□□□□ 0.95
RIPK2O43353 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.98■□□□□ 0.95
RIPK2O43353 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RIPK2O43353 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.98■□□□□ 0.95
RIPK2O43353 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RIPK2O43353 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.98■□□□□ 0.95
RIPK2O43353 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RIPK2O43353 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
RIPK2O43353 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.98■□□□□ 0.95
RIPK2O43353 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK2O43353 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPK2O43353 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK2O43353 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 SMG8-203ENST00000578922 2178 ntBASIC20.97■□□□□ 0.95
RIPK2O43353 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RIPK2O43353 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.97■□□□□ 0.95
RIPK2O43353 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RIPK2O43353 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPK2O43353 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 GUSBP5-201ENST00000418136 578 ntBASIC20.97■□□□□ 0.95
RIPK2O43353 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIPK2O43353 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RIPK2O43353 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RIPK2O43353 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK2O43353 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RIPK2O43353 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RIPK2O43353 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPK2O43353 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPK2O43353 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.96■□□□□ 0.95
RIPK2O43353 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPK2O43353 MIR4466-201ENST00000606121 54 ntBASIC20.96■□□□□ 0.95
RIPK2O43353 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RIPK2O43353 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RIPK2O43353 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RIPK2O43353 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RIPK2O43353 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RIPK2O43353 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPK2O43353 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPK2O43353 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RIPK2O43353 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RIPK2O43353 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RIPK2O43353 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RIPK2O43353 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RIPK2O43353 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RIPK2O43353 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIPK2O43353 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms