Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SRGAP3O43295 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.73■■□□□ 1.71
SRGAP3O43295 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.73■■□□□ 1.71
SRGAP3O43295 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.73■■□□□ 1.71
SRGAP3O43295 RARRES2P4-201ENST00000514074 484 ntBASIC25.73■■□□□ 1.71
SRGAP3O43295 AC069236.1-201ENST00000604339 616 ntBASIC25.73■■□□□ 1.71
SRGAP3O43295 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SRGAP3O43295 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.73■■□□□ 1.71
SRGAP3O43295 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SRGAP3O43295 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SRGAP3O43295 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.73■■□□□ 1.71
SRGAP3O43295 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SRGAP3O43295 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SRGAP3O43295 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SRGAP3O43295 AC093787.1-201ENST00000450396 207 ntBASIC25.72■■□□□ 1.71
SRGAP3O43295 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.72■■□□□ 1.71
SRGAP3O43295 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.72■■□□□ 1.71
SRGAP3O43295 AC083906.2-201ENST00000511578 360 ntBASIC25.72■■□□□ 1.71
SRGAP3O43295 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.72■■□□□ 1.71
SRGAP3O43295 FAM21FP-204ENST00000608637 956 ntBASIC25.72■■□□□ 1.71
SRGAP3O43295 OR10C1-204ENST00000622521 1039 ntBASIC25.72■■□□□ 1.71
SRGAP3O43295 AC008694.1-202ENST00000636953 945 ntBASIC25.72■■□□□ 1.71
SRGAP3O43295 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SRGAP3O43295 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SRGAP3O43295 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SRGAP3O43295 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SRGAP3O43295 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SRGAP3O43295 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SRGAP3O43295 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
SRGAP3O43295 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.71■■□□□ 1.71
SRGAP3O43295 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
SRGAP3O43295 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.71■■□□□ 1.71
SRGAP3O43295 AF201337.1-201ENST00000520239 748 ntBASIC25.71■■□□□ 1.71
SRGAP3O43295 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.71■■□□□ 1.71
SRGAP3O43295 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.71■■□□□ 1.71
SRGAP3O43295 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SRGAP3O43295 AL121832.2-201ENST00000610979 668 ntBASIC25.71■■□□□ 1.71
SRGAP3O43295 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SRGAP3O43295 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
SRGAP3O43295 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SRGAP3O43295 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
SRGAP3O43295 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SRGAP3O43295 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.7■■□□□ 1.71
SRGAP3O43295 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.7■■□□□ 1.7
SRGAP3O43295 GPX1P1-201ENST00000388829 606 ntBASIC25.7■■□□□ 1.7
SRGAP3O43295 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.7■■□□□ 1.7
SRGAP3O43295 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.7■■□□□ 1.7
SRGAP3O43295 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.7■■□□□ 1.7
SRGAP3O43295 AC105036.2-201ENST00000569468 176 ntBASIC25.7■■□□□ 1.7
SRGAP3O43295 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SRGAP3O43295 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.7■■□□□ 1.7
SRGAP3O43295 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SRGAP3O43295 AC011484.1-201ENST00000377652 1995 ntBASIC25.69■■□□□ 1.7
SRGAP3O43295 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SRGAP3O43295 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SRGAP3O43295 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SRGAP3O43295 HLA-L-209ENST00000420110 1011 ntBASIC25.69■■□□□ 1.7
SRGAP3O43295 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SRGAP3O43295 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SRGAP3O43295 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.69■■□□□ 1.7
SRGAP3O43295 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SRGAP3O43295 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.69■■□□□ 1.7
SRGAP3O43295 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SRGAP3O43295 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.69■■□□□ 1.7
SRGAP3O43295 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.69■■□□□ 1.7
SRGAP3O43295 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SRGAP3O43295 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SRGAP3O43295 ID1-201ENST00000376105 1233 ntBASIC25.68■■□□□ 1.7
SRGAP3O43295 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.68■■□□□ 1.7
SRGAP3O43295 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SRGAP3O43295 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
SRGAP3O43295 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.67■■□□□ 1.7
SRGAP3O43295 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 GUSBP6-202ENST00000438529 1198 ntBASIC25.67■■□□□ 1.7
SRGAP3O43295 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.67■■□□□ 1.7
SRGAP3O43295 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SRGAP3O43295 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SRGAP3O43295 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 AC121338.2-201ENST00000622535 1744 ntBASIC25.66■■□□□ 1.7
SRGAP3O43295 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.66■■□□□ 1.7
SRGAP3O43295 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms