Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.5■□□□□ 0.71
RRP8O43159 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.5■□□□□ 0.71
RRP8O43159 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.5■□□□□ 0.71
RRP8O43159 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RRP8O43159 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.5■□□□□ 0.71
RRP8O43159 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.5■□□□□ 0.71
RRP8O43159 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.5■□□□□ 0.71
RRP8O43159 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RRP8O43159 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.49■□□□□ 0.71
RRP8O43159 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 AC133681.1-201ENST00000465482 601 ntBASIC19.49■□□□□ 0.71
RRP8O43159 KRT18P35-201ENST00000510488 1269 ntBASIC19.49■□□□□ 0.71
RRP8O43159 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.49■□□□□ 0.71
RRP8O43159 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RRP8O43159 AC124016.1-201ENST00000609552 612 ntBASIC19.49■□□□□ 0.71
RRP8O43159 AL590326.2-201ENST00000625139 305 ntBASIC19.49■□□□□ 0.71
RRP8O43159 AL023875.1-201ENST00000640777 796 ntBASIC19.49■□□□□ 0.71
RRP8O43159 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RRP8O43159 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RRP8O43159 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RRP8O43159 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.48■□□□□ 0.71
RRP8O43159 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RRP8O43159 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.48■□□□□ 0.71
RRP8O43159 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RRP8O43159 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.48■□□□□ 0.71
RRP8O43159 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.48■□□□□ 0.71
RRP8O43159 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RRP8O43159 AC012306.2-201ENST00000609350 630 ntBASIC19.48■□□□□ 0.71
RRP8O43159 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.48■□□□□ 0.71
RRP8O43159 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RRP8O43159 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
RRP8O43159 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RRP8O43159 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.47■□□□□ 0.71
RRP8O43159 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 MTDHP1-201ENST00000605323 784 ntBASIC19.47■□□□□ 0.71
RRP8O43159 AC110285.5-201ENST00000611501 352 ntBASIC19.47■□□□□ 0.71
RRP8O43159 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RRP8O43159 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RRP8O43159 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.46■□□□□ 0.71
RRP8O43159 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RRP8O43159 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.46■□□□□ 0.71
RRP8O43159 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.46■□□□□ 0.71
RRP8O43159 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.46■□□□□ 0.71
RRP8O43159 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RRP8O43159 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
RRP8O43159 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RRP8O43159 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RRP8O43159 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RRP8O43159 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.45■□□□□ 0.7
RRP8O43159 PRKY-204ENST00000533551 1019 ntBASIC19.45■□□□□ 0.7
RRP8O43159 AL049597.2-201ENST00000565575 961 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms