Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NDUFA1O15239 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NDUFA1O15239 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NDUFA1O15239 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NDUFA1O15239 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NDUFA1O15239 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NDUFA1O15239 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NDUFA1O15239 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFA1O15239 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.11□□□□□ -0.15
NDUFA1O15239 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFA1O15239 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NDUFA1O15239 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.11□□□□□ -0.15
NDUFA1O15239 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.11□□□□□ -0.15
NDUFA1O15239 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFA1O15239 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFA1O15239 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NDUFA1O15239 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NDUFA1O15239 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFA1O15239 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 SMG8-203ENST00000578922 2178 ntBASIC14.1□□□□□ -0.15
NDUFA1O15239 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFA1O15239 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFA1O15239 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NDUFA1O15239 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 AC087289.5-201ENST00000586076 3175 ntBASIC14.09□□□□□ -0.15
NDUFA1O15239 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
NDUFA1O15239 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NDUFA1O15239 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.09□□□□□ -0.15
NDUFA1O15239 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFA1O15239 AL512631.2-201ENST00000604634 923 ntBASIC14.09□□□□□ -0.15
NDUFA1O15239 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.09□□□□□ -0.15
NDUFA1O15239 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 AL020996.1-203ENST00000536896 2307 ntBASIC14.09□□□□□ -0.15
NDUFA1O15239 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFA1O15239 AC003102.1-202ENST00000563394 1796 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms