Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCDH17O14917 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDH17O14917 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH17O14917 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH17O14917 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH17O14917 AL157384.1-201ENST00000445995 2473 ntBASIC19.7■□□□□ 0.74
PCDH17O14917 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 AC003102.1-202ENST00000563394 1796 ntBASIC19.7■□□□□ 0.74
PCDH17O14917 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH17O14917 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDH17O14917 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 MIR663A-201ENST00000385250 93 ntBASIC19.7■□□□□ 0.74
PCDH17O14917 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH17O14917 AC005181.1-201ENST00000604782 1256 ntBASIC19.7■□□□□ 0.74
PCDH17O14917 AC243732.1-201ENST00000612648 864 ntBASIC19.7■□□□□ 0.74
PCDH17O14917 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDH17O14917 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH17O14917 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH17O14917 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH17O14917 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDH17O14917 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH17O14917 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDH17O14917 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDH17O14917 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH17O14917 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH17O14917 AL162412.1-201ENST00000567129 965 ntBASIC19.69■□□□□ 0.74
PCDH17O14917 AC104771.1-201ENST00000603335 964 ntBASIC19.69■□□□□ 0.74
PCDH17O14917 AL121832.2-201ENST00000610979 668 ntBASIC19.69■□□□□ 0.74
PCDH17O14917 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDH17O14917 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDH17O14917 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDH17O14917 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDH17O14917 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDH17O14917 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDH17O14917 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 GPX1P1-201ENST00000388829 606 ntBASIC19.68■□□□□ 0.74
PCDH17O14917 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.68■□□□□ 0.74
PCDH17O14917 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH17O14917 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH17O14917 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDH17O14917 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH17O14917 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH17O14917 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 CNN2P6-201ENST00000439038 900 ntBASIC19.67■□□□□ 0.74
PCDH17O14917 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH17O14917 SLC7A5P2-201ENST00000553010 536 ntBASIC19.67■□□□□ 0.74
PCDH17O14917 AC133552.2-202ENST00000575694 574 ntBASIC19.67■□□□□ 0.74
PCDH17O14917 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDH17O14917 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH17O14917 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH17O14917 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH17O14917 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH17O14917 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDH17O14917 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH17O14917 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms