Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHD2O14647 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CHD2O14647 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD2O14647 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC29.17■■■□□ 2.26
CHD2O14647 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
CHD2O14647 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD2O14647 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC29.17■■■□□ 2.26
CHD2O14647 LTK-203ENST00000453182 2412 ntTSL 2 BASIC29.17■■■□□ 2.26
CHD2O14647 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC29.17■■■□□ 2.26
CHD2O14647 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CHD2O14647 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC29.17■■■□□ 2.26
CHD2O14647 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC29.16■■■□□ 2.26
CHD2O14647 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHD2O14647 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
CHD2O14647 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC29.16■■■□□ 2.26
CHD2O14647 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CHD2O14647 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC29.16■■■□□ 2.26
CHD2O14647 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHD2O14647 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CHD2O14647 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CHD2O14647 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC29.16■■■□□ 2.26
CHD2O14647 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 PRKY-204ENST00000533551 1019 ntBASIC29.15■■■□□ 2.26
CHD2O14647 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC29.15■■■□□ 2.26
CHD2O14647 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC29.15■■■□□ 2.26
CHD2O14647 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CHD2O14647 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHD2O14647 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC29.14■■■□□ 2.26
CHD2O14647 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC29.14■■■□□ 2.26
CHD2O14647 AC005829.2-201ENST00000571422 1056 ntBASIC29.14■■■□□ 2.26
CHD2O14647 AC120498.8-201ENST00000614275 531 ntBASIC29.14■■■□□ 2.26
CHD2O14647 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC29.14■■■□□ 2.26
CHD2O14647 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CHD2O14647 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHD2O14647 AC068473.5-201ENST00000616428 2072 ntBASIC29.14■■■□□ 2.25
CHD2O14647 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD2O14647 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHD2O14647 P4HB-223ENST00000576390 439 ntTSL 4 BASIC29.13■■■□□ 2.25
CHD2O14647 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHD2O14647 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CHD2O14647 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 CABP2-204ENST00000636477 941 ntTSL 5 BASIC29.13■■■□□ 2.25
CHD2O14647 AC026471.6-201ENST00000622954 1905 ntBASIC29.12■■■□□ 2.25
CHD2O14647 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD2O14647 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC29.12■■■□□ 2.25
CHD2O14647 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD2O14647 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC29.12■■■□□ 2.25
CHD2O14647 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD2O14647 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CHD2O14647 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHD2O14647 MOK-233ENST00000524214 1539 ntTSL 2 BASIC29.12■■■□□ 2.25
CHD2O14647 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD2O14647 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD2O14647 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD2O14647 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
CHD2O14647 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD2O14647 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CHD2O14647 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC29.11■■■□□ 2.25
CHD2O14647 THEM4-205ENST00000489410 643 ntTSL 2 BASIC29.1■■■□□ 2.25
CHD2O14647 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC29.1■■■□□ 2.25
CHD2O14647 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CHD2O14647 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
CHD2O14647 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 AC093323.1-202ENST00000635031 2045 ntBASIC29.1■■■□□ 2.25
CHD2O14647 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CHD2O14647 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
CHD2O14647 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC29.1■■■□□ 2.25
CHD2O14647 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC29.1■■■□□ 2.25
CHD2O14647 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
CHD2O14647 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CHD2O14647 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD2O14647 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC29.09■■■□□ 2.25
CHD2O14647 NARF-205ENST00000412079 1760 ntTSL 5 BASIC29.09■■■□□ 2.25
CHD2O14647 RER1-204ENST00000378518 522 ntTSL 3 BASIC29.09■■■□□ 2.25
CHD2O14647 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC29.09■■■□□ 2.25
CHD2O14647 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms