Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDC7O00311 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC7O00311 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC7O00311 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC7O00311 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.28■□□□□ 0.84
CDC7O00311 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC7O00311 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDC7O00311 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDC7O00311 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.28■□□□□ 0.84
CDC7O00311 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC7O00311 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.27■□□□□ 0.84
CDC7O00311 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CDC7O00311 AP005212.1-201ENST00000581547 1997 ntBASIC20.27■□□□□ 0.84
CDC7O00311 FP700111.2-201ENST00000619190 1892 ntBASIC20.27■□□□□ 0.84
CDC7O00311 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CDC7O00311 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDC7O00311 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 AC245052.3-201ENST00000450182 901 ntBASIC20.27■□□□□ 0.84
CDC7O00311 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDC7O00311 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC7O00311 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.27■□□□□ 0.83
CDC7O00311 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC7O00311 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC7O00311 AC019069.1-201ENST00000610008 1333 ntBASIC20.27■□□□□ 0.83
CDC7O00311 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC7O00311 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC7O00311 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
CDC7O00311 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.26■□□□□ 0.83
CDC7O00311 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC7O00311 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.26■□□□□ 0.83
CDC7O00311 AC027702.1-201ENST00000563810 1770 ntBASIC20.26■□□□□ 0.83
CDC7O00311 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDC7O00311 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.25■□□□□ 0.83
CDC7O00311 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.25■□□□□ 0.83
CDC7O00311 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDC7O00311 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC7O00311 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.25■□□□□ 0.83
CDC7O00311 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.25■□□□□ 0.83
CDC7O00311 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CDC7O00311 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CDC7O00311 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC7O00311 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.25■□□□□ 0.83
CDC7O00311 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC7O00311 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDC7O00311 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CDC7O00311 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms