Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.23■□□□□ 0.83
EIF3FO00303 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3FO00303 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3FO00303 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.23■□□□□ 0.83
EIF3FO00303 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.23■□□□□ 0.83
EIF3FO00303 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.23■□□□□ 0.83
EIF3FO00303 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3FO00303 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.23■□□□□ 0.83
EIF3FO00303 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.23■□□□□ 0.83
EIF3FO00303 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
EIF3FO00303 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
EIF3FO00303 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EIF3FO00303 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.22■□□□□ 0.83
EIF3FO00303 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.22■□□□□ 0.83
EIF3FO00303 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 AC137761.2-201ENST00000561729 223 ntBASIC20.22■□□□□ 0.83
EIF3FO00303 AC145350.3-201ENST00000569033 163 ntBASIC20.22■□□□□ 0.83
EIF3FO00303 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
EIF3FO00303 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EIF3FO00303 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EIF3FO00303 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EIF3FO00303 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.21■□□□□ 0.83
EIF3FO00303 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3FO00303 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3FO00303 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3FO00303 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
EIF3FO00303 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.21■□□□□ 0.83
EIF3FO00303 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3FO00303 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3FO00303 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3FO00303 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.2■□□□□ 0.82
EIF3FO00303 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
EIF3FO00303 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3FO00303 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3FO00303 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.2■□□□□ 0.82
EIF3FO00303 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3FO00303 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3FO00303 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.2■□□□□ 0.82
EIF3FO00303 AC010536.3-201ENST00000620306 533 ntBASIC20.2■□□□□ 0.82
EIF3FO00303 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3FO00303 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.2■□□□□ 0.82
EIF3FO00303 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.2■□□□□ 0.82
EIF3FO00303 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 AC027702.1-201ENST00000563810 1770 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 AC007322.3-201ENST00000426526 701 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 CDV3P1-201ENST00000471403 739 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 TERF1P5-201ENST00000477545 1207 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 AL162430.1-201ENST00000480705 870 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 AC007322.4-201ENST00000509611 723 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.19■□□□□ 0.82
EIF3FO00303 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.19■□□□□ 0.82
EIF3FO00303 AL162412.1-201ENST00000567129 965 ntBASIC20.19■□□□□ 0.82
EIF3FO00303 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EIF3FO00303 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.19■□□□□ 0.82
EIF3FO00303 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3FO00303 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3FO00303 AC007225.1-201ENST00000566331 1836 ntBASIC20.18■□□□□ 0.82
EIF3FO00303 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3FO00303 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.18■□□□□ 0.82
EIF3FO00303 AC006015.1-201ENST00000429970 570 ntBASIC20.18■□□□□ 0.82
EIF3FO00303 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3FO00303 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EIF3FO00303 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3FO00303 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms