Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 KRT18P21-201ENST00000515767 1272 ntBASIC17.19■□□□□ 0.34
RNF223E7ERA6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
RNF223E7ERA6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 AC010331.1-201ENST00000611423 582 ntBASIC17.18■□□□□ 0.34
RNF223E7ERA6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 AC133561.1-201ENST00000568600 2415 ntBASIC17.18■□□□□ 0.34
RNF223E7ERA6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF223E7ERA6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF223E7ERA6 AC010542.4-201ENST00000563151 1910 ntBASIC17.17■□□□□ 0.34
RNF223E7ERA6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 TSPY7P-201ENST00000431358 1114 ntBASIC17.17■□□□□ 0.34
RNF223E7ERA6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF223E7ERA6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 BX088651.1-201ENST00000540551 451 ntBASIC17.17■□□□□ 0.34
RNF223E7ERA6 AC105020.6-201ENST00000621523 1217 ntBASIC17.17■□□□□ 0.34
RNF223E7ERA6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RNF223E7ERA6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RNF223E7ERA6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF223E7ERA6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF223E7ERA6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF223E7ERA6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms