Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CFAP99D6REC4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP99D6REC4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.59■□□□□ 0.89
CFAP99D6REC4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP99D6REC4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP99D6REC4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP99D6REC4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP99D6REC4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP99D6REC4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP99D6REC4 AC243732.1-201ENST00000612648 864 ntBASIC20.58■□□□□ 0.89
CFAP99D6REC4 AL049796.1-201ENST00000565336 1766 ntBASIC20.58■□□□□ 0.89
CFAP99D6REC4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP99D6REC4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP99D6REC4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP99D6REC4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.58■□□□□ 0.88
CFAP99D6REC4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CFAP99D6REC4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP99D6REC4 AC010536.3-201ENST00000620306 533 ntBASIC20.57■□□□□ 0.88
CFAP99D6REC4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP99D6REC4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CFAP99D6REC4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP99D6REC4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP99D6REC4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP99D6REC4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP99D6REC4 RBM17P2-201ENST00000616397 1405 ntBASIC20.56■□□□□ 0.88
CFAP99D6REC4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP99D6REC4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 AC011767.1-201ENST00000617410 1153 ntBASIC20.56■□□□□ 0.88
CFAP99D6REC4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CFAP99D6REC4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CFAP99D6REC4 RNF165-205ENST00000588679 2904 ntBASIC20.56■□□□□ 0.88
CFAP99D6REC4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 MFSD11-216ENST00000590393 1141 ntBASIC20.55■□□□□ 0.88
CFAP99D6REC4 RARRES2P11-201ENST00000635158 484 ntBASIC20.55■□□□□ 0.88
CFAP99D6REC4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CFAP99D6REC4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CFAP99D6REC4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 TERF1P5-201ENST00000477545 1207 ntBASIC20.54■□□□□ 0.88
CFAP99D6REC4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.54■□□□□ 0.88
CFAP99D6REC4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP99D6REC4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP99D6REC4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms