Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TUBAL3A6NHL2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBAL3A6NHL2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.52■□□□□ 0.55
TUBAL3A6NHL2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TUBAL3A6NHL2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TUBAL3A6NHL2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TUBAL3A6NHL2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 AC068338.2-201ENST00000563278 1430 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 AL391422.3-201ENST00000603791 2761 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 MKRN4P-201ENST00000444706 1521 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 AC069236.1-201ENST00000604339 616 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 AC139530.1-201ENST00000575312 1977 ntBASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBAL3A6NHL2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 AC007322.4-201ENST00000509611 723 ntBASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 OR10C1-204ENST00000622521 1039 ntBASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TUBAL3A6NHL2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 MIR4651-201ENST00000582622 73 ntBASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBAL3A6NHL2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 AC066615.1-201ENST00000640911 628 ntBASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBAL3A6NHL2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms