Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HFM1A2PYH4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HFM1A2PYH4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 KRT18P6-201ENST00000555540 1265 ntBASIC30.81■■■□□ 2.52
HFM1A2PYH4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 AC105020.6-201ENST00000621523 1217 ntBASIC30.81■■■□□ 2.52
HFM1A2PYH4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC30.81■■■□□ 2.52
HFM1A2PYH4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
HFM1A2PYH4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
HFM1A2PYH4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HFM1A2PYH4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HFM1A2PYH4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.8■■■□□ 2.52
HFM1A2PYH4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC30.79■■■□□ 2.52
HFM1A2PYH4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
HFM1A2PYH4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
HFM1A2PYH4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
HFM1A2PYH4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
HFM1A2PYH4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HFM1A2PYH4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HFM1A2PYH4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.79■■■□□ 2.52
HFM1A2PYH4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
HFM1A2PYH4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.79■■■□□ 2.52
HFM1A2PYH4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
HFM1A2PYH4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
HFM1A2PYH4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
HFM1A2PYH4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
HFM1A2PYH4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
HFM1A2PYH4 AC011484.1-201ENST00000377652 1995 ntBASIC30.78■■■□□ 2.52
HFM1A2PYH4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
HFM1A2PYH4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.77■■■□□ 2.52
HFM1A2PYH4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HFM1A2PYH4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
HFM1A2PYH4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC30.76■■■□□ 2.52
HFM1A2PYH4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HFM1A2PYH4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
HFM1A2PYH4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC30.76■■■□□ 2.51
HFM1A2PYH4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
HFM1A2PYH4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HFM1A2PYH4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HFM1A2PYH4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HFM1A2PYH4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.76■■■□□ 2.51
HFM1A2PYH4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
HFM1A2PYH4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HFM1A2PYH4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
HFM1A2PYH4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC30.75■■■□□ 2.51
HFM1A2PYH4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
HFM1A2PYH4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HFM1A2PYH4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
HFM1A2PYH4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
HFM1A2PYH4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HFM1A2PYH4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms