Protein–RNA interactions for Protein: A0A1B0GUJ8

PNMA8C, Paraneoplastic antigen-like protein 8C, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA8CA0A1B0GUJ8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC027702.1-201ENST00000563810 1770 ntBASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC010141.3-201ENST00000456659 717 ntBASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC068587.7-201ENST00000641602 218 ntBASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PNMA8CA0A1B0GUJ8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.61■□□□□ 0.57
PNMA8CA0A1B0GUJ8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC239859.2-201ENST00000444165 318 ntBASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC099791.2-201ENST00000605725 427 ntBASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PNMA8CA0A1B0GUJ8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms