Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 AC083880.1-201ENST00000608266 535 ntBASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPVL3A0A0U1RRI6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 RNA5SP413-201ENST00000516373 109 ntBASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 MIR4651-201ENST00000582622 73 ntBASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.78■□□□□ 0.28
CENPVL3A0A0U1RRI6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CENPVL3A0A0U1RRI6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.77■□□□□ 0.27
CENPVL3A0A0U1RRI6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 KRT18P68-201ENST00000392293 1000 ntBASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 AL589743.5-201ENST00000616611 1050 ntBASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CENPVL3A0A0U1RRI6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 CYP21A1P-202ENST00000354927 1481 ntBASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.75■□□□□ 0.27
CENPVL3A0A0U1RRI6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms