Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV8-4A0A0B4J246 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 AC010542.4-201ENST00000563151 1910 ntBASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 AP004607.7-201ENST00000527152 1677 ntBASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 EDA-201ENST00000338901 1233 ntBASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 AC027682.1-201ENST00000562846 899 ntBASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV8-4A0A0B4J246 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 AC096631.2-201ENST00000436136 790 ntBASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 PBX2P1-201ENST00000493219 1291 ntBASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 IGHV3-19-201ENST00000521488 291 ntBASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 AC106739.1-201ENST00000617035 715 ntBASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV8-4A0A0B4J246 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 AC133561.4-201ENST00000566112 224 ntBASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV8-4A0A0B4J246 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV8-4A0A0B4J246 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms