Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV12-1A0A0B4J245 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 AC129492.7-201ENST00000622992 756 ntBASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 AC009102.2-201ENST00000606772 1639 ntBASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV12-1A0A0B4J245 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 FP700111.2-201ENST00000619190 1892 ntBASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV12-1A0A0B4J245 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 RNF126P1-201ENST00000567452 1320 ntBASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 MIR7108-201ENST00000614319 87 ntBASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms