Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC121338.2-201ENST00000622535 1744 ntBASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC105233.4-201ENST00000642045 216 ntBASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-7A0A0A0MS04 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC008764.7-201ENST00000593779 1081 ntBASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV6-7A0A0A0MS04 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC018445.3-201ENST00000624177 1945 ntBASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-7A0A0A0MS04 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 TSPY26P-201ENST00000476365 1326 ntBASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 BX005040.4-201ENST00000637145 1518 ntBASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC099791.1-201ENST00000416440 715 ntBASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 PCDHAC2-203ENST00000615316 3011 ntBASIC17.28■□□□□ 0.36
TRBV6-7A0A0A0MS04 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC027682.1-201ENST00000562846 899 ntBASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-7A0A0A0MS04 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-7A0A0A0MS04 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-7A0A0A0MS04 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms