Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNA5SP304-201ENST00000411199 104 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 CRYZL1-206ENST00000413017 627 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 AL162431.1-202ENST00000422858 444 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 HCG23-205ENST00000426643 610 ntTSL 3 BASIC10.06□□□□□ -0.8
SLC1A1P43005 HMGN1P38-201ENST00000431116 303 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 AL049733.1-201ENST00000440178 603 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC073321.1-201ENST00000441803 654 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 AC022121.1-201ENST00000484584 579 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 RPS10P5-201ENST00000492704 531 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC021127.1-201ENST00000503589 566 ntTSL 4 BASIC10.06□□□□□ -0.8
SLC1A1P43005 AC139491.4-201ENST00000504629 354 ntTSL 5 BASIC10.06□□□□□ -0.8
SLC1A1P43005 OR7E86P-201ENST00000505858 990 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC004066.2-201ENST00000514879 572 ntTSL 4 BASIC10.06□□□□□ -0.8
SLC1A1P43005 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 AP002512.1-201ENST00000525853 653 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC044839.2-201ENST00000531982 534 ntTSL 3 BASIC10.06□□□□□ -0.8
SLC1A1P43005 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 AC025030.1-201ENST00000548007 573 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 OR4K16P-201ENST00000554603 969 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 DNM1P49-201ENST00000564895 474 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC009093.3-201ENST00000567688 351 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 RN7SL712P-201ENST00000579354 308 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 AL359921.2-201ENST00000608547 543 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 AL049794.1-201ENST00000616572 774 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC10.06□□□□□ -0.8
SLC1A1P43005 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SLC1A1P43005 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 CHODL-204ENST00000400128 2421 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 LRRTM2-202ENST00000518785 1958 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC10.06□□□□□ -0.8
SLC1A1P43005 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 STRAP-201ENST00000025399 1442 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SLC1A1P43005 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 KNOP1P2-201ENST00000605379 1317 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 TMIGD3-202ENST00000369717 1150 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AL353662.2-201ENST00000372214 645 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 HNRNPA1P34-201ENST00000391992 950 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 KRTAP9-3-201ENST00000411528 992 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AL136309.3-201ENST00000427591 266 ntTSL 3 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC024937.1-201ENST00000429793 344 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AL049542.1-201ENST00000430231 278 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 IFNWP15-201ENST00000442022 600 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 LY86-AS1-203ENST00000447858 938 ntTSL 3 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC004534.1-201ENST00000462678 489 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AC055748.1-201ENST00000489836 959 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AL121612.1-201ENST00000490252 615 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC022733.1-201ENST00000521257 739 ntTSL 3 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC135279.2-201ENST00000545001 620 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AC016168.2-202ENST00000564292 610 ntTSL 3 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC138627.1-208ENST00000568137 966 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC025627.1-201ENST00000574267 730 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 RN7SL45P-201ENST00000578050 298 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 LINC01255-205ENST00000591318 708 ntTSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 AC007228.1-201ENST00000600036 142 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 AC099518.6-201ENST00000617407 450 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC10.05□□□□□ -0.8
SLC1A1P43005 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SLC1A1P43005 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.05□□□□□ -0.8
SLC1A1P43005 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SLC1A1P43005 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC10.04□□□□□ -0.8
SLC1A1P43005 ZSCAN9-201ENST00000252207 1621 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SLC1A1P43005 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC10.04□□□□□ -0.8
SLC1A1P43005 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SLC1A1P43005 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms