Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC073583.1-201ENST00000447553 400 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ACTG1P20-201ENST00000486001 468 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 RN7SL737P-201ENST00000490246 282 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SOX5-213ENST00000541847 758 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AC135279.2-201ENST00000545001 620 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AC087761.1-201ENST00000568836 556 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 TEX26-AS1-216ENST00000592950 747 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SUSD2P2-201ENST00000611186 758 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ADAM6-202ENST00000616762 999 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 NTN4-202ENST00000344911 3152 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 CLIP1-213ENST00000540338 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 EDAR-202ENST00000376651 4303 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 TCTN3-201ENST00000265993 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 DENND2D-201ENST00000357640 2077 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AC026336.3-201ENST00000611525 2076 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ERI2-201ENST00000300005 1479 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 PCDHGC4-201ENST00000306593 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AC243967.3-201ENST00000614316 2265 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 CHRNA1-202ENST00000348749 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AC006213.2-201ENST00000587128 2193 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 ZIC4-201ENST00000383075 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 MIR25-201ENST00000384816 84 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AL590617.1-201ENST00000405630 748 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 RN7SKP120-201ENST00000410761 341 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AC078777.1-201ENST00000425371 777 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 RPL36AP35-201ENST00000426082 308 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 RPL26P34-201ENST00000431005 451 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 KIAA1456-202ENST00000447063 983 ntTSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 HSPA8P3-201ENST00000449300 780 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 PGA5-202ENST00000451616 971 ntTSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 PGAM1P1-201ENST00000504014 556 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AC093281.1-201ENST00000514239 549 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 RNU1-125P-201ENST00000516752 129 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 SLA-223ENST00000524345 1003 ntTSL 2 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 RASA4-217ENST00000538869 483 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 MYL6-206ENST00000547408 683 ntTSL 3 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 BNIP3P36-201ENST00000603076 574 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AC011894.1-201ENST00000603255 456 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 FXYD3-213ENST00000605552 837 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 AL591926.7-201ENST00000614301 211 ntBASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 LDHC-207ENST00000541669 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 C3P1-201ENST00000495140 3526 ntTSL 5 BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 LINC01193-201ENST00000553416 3401 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
SYCE2Q6PIF2 CHCHD7-207ENST00000518801 1670 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
SYCE2Q6PIF2 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SYCE2Q6PIF2 MYOCOS-201ENST00000636697 2100 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
SYCE2Q6PIF2 CCDC14-207ENST00000433542 3260 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
SYCE2Q6PIF2 CAPZA1-201ENST00000263168 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SYCE2Q6PIF2 FOXN1-201ENST00000226247 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 CALD1-203ENST00000393118 4281 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 POTEG-202ENST00000547848 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 LIFR-AS1-202ENST00000500817 1342 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
SYCE2Q6PIF2 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms