RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
PCDHGC4-201ENST00000306593 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
PCDHGC4-201ENST00000306593 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
PCDHGC4-201ENST00000306593 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
PCDHGC4-201ENST00000306593 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
PCDHGC4-201ENST00000306593 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
PCDHGC4-201ENST00000306593 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
PCDHGC4-201ENST00000306593 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
PCDHGC4-201ENST00000306593 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
PCDHGC4-201ENST00000306593 ABCC9O60706 1549 aa17.17■□□□□ 0.34
PCDHGC4-201ENST00000306593 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
PCDHGC4-201ENST00000306593 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.34
PCDHGC4-201ENST00000306593 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
PCDHGC4-201ENST00000306593 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
PCDHGC4-201ENST00000306593 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC4-201ENST00000306593 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
PCDHGC4-201ENST00000306593 APLP2Q06481 763 aa16.88■□□□□ 0.29
PCDHGC4-201ENST00000306593 NACADO15069 1562 aa16.86■□□□□ 0.29
PCDHGC4-201ENST00000306593 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
PCDHGC4-201ENST00000306593 HRCP23327 699 aa16.82■□□□□ 0.28
PCDHGC4-201ENST00000306593 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
PCDHGC4-201ENST00000306593 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
PCDHGC4-201ENST00000306593 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
PCDHGC4-201ENST00000306593 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
PCDHGC4-201ENST00000306593 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCDHGC4-201ENST00000306593 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC4-201ENST00000306593 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
PCDHGC4-201ENST00000306593 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC4-201ENST00000306593 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC4-201ENST00000306593 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
PCDHGC4-201ENST00000306593 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
PCDHGC4-201ENST00000306593 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
PCDHGC4-201ENST00000306593 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
PCDHGC4-201ENST00000306593 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC4-201ENST00000306593 EEA1Q15075 1411 aa16.24■□□□□ 0.19
PCDHGC4-201ENST00000306593 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
PCDHGC4-201ENST00000306593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
PCDHGC4-201ENST00000306593 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
PCDHGC4-201ENST00000306593 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
PCDHGC4-201ENST00000306593 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
PCDHGC4-201ENST00000306593 WIZO95785 1651 aa16.09■□□□□ 0.17
PCDHGC4-201ENST00000306593 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.17
PCDHGC4-201ENST00000306593 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
PCDHGC4-201ENST00000306593 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
PCDHGC4-201ENST00000306593 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
PCDHGC4-201ENST00000306593 SMARCA4P51532 1647 aa16.02■□□□□ 0.15
PCDHGC4-201ENST00000306593 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
PCDHGC4-201ENST00000306593 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
PCDHGC4-201ENST00000306593 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
PCDHGC4-201ENST00000306593 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
PCDHGC4-201ENST00000306593 CLIP1P30622 1438 aa15.91■□□□□ 0.14
PCDHGC4-201ENST00000306593 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
PCDHGC4-201ENST00000306593 ITGAEP38570 1179 aa15.89■□□□□ 0.13
PCDHGC4-201ENST00000306593 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
PCDHGC4-201ENST00000306593 SOGA1O94964 1423 aa15.83■□□□□ 0.12
PCDHGC4-201ENST00000306593 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
PCDHGC4-201ENST00000306593 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
PCDHGC4-201ENST00000306593 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC4-201ENST00000306593 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.11
PCDHGC4-201ENST00000306593 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
PCDHGC4-201ENST00000306593 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
PCDHGC4-201ENST00000306593 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
PCDHGC4-201ENST00000306593 NEFLP07196 543 aa15.59■□□□□ 0.09
PCDHGC4-201ENST00000306593 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
PCDHGC4-201ENST00000306593 CUX2O14529 1486 aa15.53■□□□□ 0.08
PCDHGC4-201ENST00000306593 CLSPNQ9HAW4 1339 aa15.52■□□□□ 0.08
PCDHGC4-201ENST00000306593 ACIN1Q9UKV3 1341 aaKnown RBP15.51■□□□□ 0.07
PCDHGC4-201ENST00000306593 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
PCDHGC4-201ENST00000306593 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
PCDHGC4-201ENST00000306593 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
PCDHGC4-201ENST00000306593 BICRAQ9NZM4 1560 aa15.5■□□□□ 0.07
PCDHGC4-201ENST00000306593 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
PCDHGC4-201ENST00000306593 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
PCDHGC4-201ENST00000306593 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
PCDHGC4-201ENST00000306593 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
PCDHGC4-201ENST00000306593 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
PCDHGC4-201ENST00000306593 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
PCDHGC4-201ENST00000306593 KIF21BO75037 1637 aa15.45■□□□□ 0.06
PCDHGC4-201ENST00000306593 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
PCDHGC4-201ENST00000306593 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
PCDHGC4-201ENST00000306593 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
PCDHGC4-201ENST00000306593 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
PCDHGC4-201ENST00000306593 UNC13AQ9UPW8 1703 aa15.42■□□□□ 0.06
PCDHGC4-201ENST00000306593 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
PCDHGC4-201ENST00000306593 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
PCDHGC4-201ENST00000306593 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
PCDHGC4-201ENST00000306593 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
PCDHGC4-201ENST00000306593 ANP32CO43423 234 aa15.36■□□□□ 0.05
PCDHGC4-201ENST00000306593 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
PCDHGC4-201ENST00000306593 FBLN2P98095 1184 aa15.36■□□□□ 0.05
PCDHGC4-201ENST00000306593 TONSLQ96HA7 1378 aa15.35■□□□□ 0.05
PCDHGC4-201ENST00000306593 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
PCDHGC4-201ENST00000306593 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
PCDHGC4-201ENST00000306593 CFTRP13569 1480 aa15.34■□□□□ 0.05
PCDHGC4-201ENST00000306593 MYT1Q01538 1121 aa15.33■□□□□ 0.04
PCDHGC4-201ENST00000306593 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
PCDHGC4-201ENST00000306593 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.03
PCDHGC4-201ENST00000306593 FMN1Q68DA7 1419 aa15.27■□□□□ 0.03
PCDHGC4-201ENST00000306593 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
PCDHGC4-201ENST00000306593 ARHGAP35Q9NRY4 1499 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms