RNA–Protein interactions for RNA: ENST00000553416.5

LINC01193-201, Transcript of long intergenic non-protein coding RNA 1193, humanhuman

TSL 1 (best) BASIC

Gene LINC01193, Length 3,401 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01193-201ENST00000553416 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
LINC01193-201ENST00000553416 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
LINC01193-201ENST00000553416 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
LINC01193-201ENST00000553416 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
LINC01193-201ENST00000553416 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
LINC01193-201ENST00000553416 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
LINC01193-201ENST00000553416 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
LINC01193-201ENST00000553416 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
LINC01193-201ENST00000553416 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
LINC01193-201ENST00000553416 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
LINC01193-201ENST00000553416 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
LINC01193-201ENST00000553416 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
LINC01193-201ENST00000553416 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
LINC01193-201ENST00000553416 HRCP23327 699 aa17.55■□□□□ 0.4
LINC01193-201ENST00000553416 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
LINC01193-201ENST00000553416 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
LINC01193-201ENST00000553416 ABCC9O60706 1549 aa17.18■□□□□ 0.34
LINC01193-201ENST00000553416 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
LINC01193-201ENST00000553416 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
LINC01193-201ENST00000553416 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
LINC01193-201ENST00000553416 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
LINC01193-201ENST00000553416 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
LINC01193-201ENST00000553416 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
LINC01193-201ENST00000553416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
LINC01193-201ENST00000553416 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
LINC01193-201ENST00000553416 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
LINC01193-201ENST00000553416 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC01193-201ENST00000553416 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
LINC01193-201ENST00000553416 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
LINC01193-201ENST00000553416 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
LINC01193-201ENST00000553416 WIZO95785 1651 aa16.58■□□□□ 0.24
LINC01193-201ENST00000553416 NACADO15069 1562 aa16.51■□□□□ 0.23
LINC01193-201ENST00000553416 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
LINC01193-201ENST00000553416 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
LINC01193-201ENST00000553416 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
LINC01193-201ENST00000553416 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
LINC01193-201ENST00000553416 SOGA1O94964 1423 aa16.37■□□□□ 0.21
LINC01193-201ENST00000553416 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
LINC01193-201ENST00000553416 APLP2Q06481 763 aa16.35■□□□□ 0.21
LINC01193-201ENST00000553416 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
LINC01193-201ENST00000553416 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
LINC01193-201ENST00000553416 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
LINC01193-201ENST00000553416 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
LINC01193-201ENST00000553416 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
LINC01193-201ENST00000553416 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
LINC01193-201ENST00000553416 ITGAEP38570 1179 aa16.16■□□□□ 0.18
LINC01193-201ENST00000553416 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
LINC01193-201ENST00000553416 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
LINC01193-201ENST00000553416 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
LINC01193-201ENST00000553416 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
LINC01193-201ENST00000553416 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
LINC01193-201ENST00000553416 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
LINC01193-201ENST00000553416 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
LINC01193-201ENST00000553416 SMARCA2P51531 1590 aa16.1■□□□□ 0.17
LINC01193-201ENST00000553416 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
LINC01193-201ENST00000553416 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
LINC01193-201ENST00000553416 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
LINC01193-201ENST00000553416 CLIP1P30622 1438 aa16.02■□□□□ 0.15
LINC01193-201ENST00000553416 MIER1Q8N108 512 aa15.96■□□□□ 0.15
LINC01193-201ENST00000553416 EEA1Q15075 1411 aa15.94■□□□□ 0.14
LINC01193-201ENST00000553416 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
LINC01193-201ENST00000553416 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
LINC01193-201ENST00000553416 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
LINC01193-201ENST00000553416 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
LINC01193-201ENST00000553416 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
LINC01193-201ENST00000553416 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
LINC01193-201ENST00000553416 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
LINC01193-201ENST00000553416 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
LINC01193-201ENST00000553416 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
LINC01193-201ENST00000553416 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
LINC01193-201ENST00000553416 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
LINC01193-201ENST00000553416 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
LINC01193-201ENST00000553416 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.12
LINC01193-201ENST00000553416 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
LINC01193-201ENST00000553416 KIF21BO75037 1637 aa15.64■□□□□ 0.09
LINC01193-201ENST00000553416 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
LINC01193-201ENST00000553416 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
LINC01193-201ENST00000553416 BCANQ96GW7 911 aa15.58■□□□□ 0.08
LINC01193-201ENST00000553416 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
LINC01193-201ENST00000553416 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
LINC01193-201ENST00000553416 CUX2O14529 1486 aa15.55■□□□□ 0.08
LINC01193-201ENST00000553416 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
LINC01193-201ENST00000553416 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
LINC01193-201ENST00000553416 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
LINC01193-201ENST00000553416 CCNB3Q8WWL7 1395 aa15.52■□□□□ 0.08
LINC01193-201ENST00000553416 PEG3Q9GZU2 1588 aa15.5■□□□□ 0.07
LINC01193-201ENST00000553416 CUX1P39880 1505 aa15.48■□□□□ 0.07
LINC01193-201ENST00000553416 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
LINC01193-201ENST00000553416 CARMIL1Q5VZK9 1371 aa15.47■□□□□ 0.07
LINC01193-201ENST00000553416 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
LINC01193-201ENST00000553416 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
LINC01193-201ENST00000553416 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
LINC01193-201ENST00000553416 IGF1RP08069 1367 aa15.42■□□□□ 0.06
LINC01193-201ENST00000553416 ARHGAP35Q9NRY4 1499 aa15.41■□□□□ 0.06
LINC01193-201ENST00000553416 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
LINC01193-201ENST00000553416 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
LINC01193-201ENST00000553416 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
LINC01193-201ENST00000553416 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
LINC01193-201ENST00000553416 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
LINC01193-201ENST00000553416 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 413.1 ms