Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 OR52N2-201ENST00000317037 1035 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ADD3-AS1-201ENST00000369655 1147 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RNVU1-17-201ENST00000384619 164 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ACSM4-201ENST00000399422 2142 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 B3GALNT2P1-201ENST00000404344 1295 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 SSR1P1-201ENST00000407630 814 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 CRYZP1-201ENST00000428923 947 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC016738.2-201ENST00000439150 493 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 C1QTNF9-AS1-201ENST00000449656 470 ntTSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 CTSLP4-201ENST00000454614 1002 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RNU7-92P-201ENST00000458830 76 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RNU7-173P-201ENST00000458903 76 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RN7SL586P-201ENST00000479137 296 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AP002784.1-201ENST00000506309 546 ntTSL 4 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 USP32P2-204ENST00000508093 1174 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 LINC02217-203ENST00000508677 296 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 RACK1-233ENST00000514455 791 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC008667.1-201ENST00000515296 568 ntTSL 4 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 GOT1L1-202ENST00000518826 497 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AL929601.1-202ENST00000551067 418 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC129492.4-201ENST00000581248 465 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 FXYD5-210ENST00000588699 927 ntTSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ZNF793-AS1-204ENST00000588845 545 ntTSL 3 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC007228.1-201ENST00000600036 142 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC090922.1-201ENST00000606244 1018 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AP000769.1-201ENST00000619960 844 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 SLC6A15-211ENST00000552192 2221 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 LRRC52-201ENST00000294818 1369 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 TMEM130-205ENST00000450876 3891 ntTSL 2 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 MSRA-210ENST00000528246 1706 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AC130448.1-201ENST00000624179 1733 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 CREM-205ENST00000348787 1821 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 AL138847.2-201ENST00000624477 1819 ntBASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 CYP17A1-201ENST00000369887 1870 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC8.94□□□□□ -0.98
NPIPA3F8WFD2 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 C1orf74-201ENST00000294811 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC132825.3-201ENST00000562182 4710 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CCDC69-201ENST00000355417 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 ZNF259P1-202ENST00000572422 4912 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 TCF4-231ENST00000566279 2128 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC012651.1-204ENST00000495723 3881 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 TBC1D5-210ENST00000429924 2477 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 PRG3-201ENST00000287143 869 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RNA5SP174-201ENST00000362702 118 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 HNRNPA3P14-201ENST00000444546 1150 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AL139287.1-201ENST00000444968 386 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 MTND4P30-201ENST00000450281 899 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RN7SL798P-201ENST00000468562 301 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RN7SL361P-201ENST00000470785 298 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RN7SL38P-201ENST00000485238 296 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC025576.2-201ENST00000535806 390 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AP002840.1-201ENST00000546284 524 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC092718.2-203ENST00000561808 789 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 MIR4253-201ENST00000581187 68 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 MIR6744-201ENST00000619480 66 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC001226.1-201ENST00000620512 539 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AC004381.2-201ENST00000637768 1329 ntBASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CABYR-218ENST00000627314 1622 ntTSL 2 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 CLEC4M-202ENST00000327325 1935 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
NPIPA3F8WFD2 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms