Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 TULP3-202ENST00000448120 3076 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SLC1A1P43005 AC084876.2-201ENST00000624844 1709 ntBASIC10.19□□□□□ -0.78
SLC1A1P43005 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SLC1A1P43005 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SLC1A1P43005 AL133492.1-201ENST00000617854 3955 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 MAPK10-375ENST00000641989 2331 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 ZNF429-201ENST00000358491 2233 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
SLC1A1P43005 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 TTC1-205ENST00000522793 1432 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 POTEKP-201ENST00000397487 2688 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 EDA-213ENST00000616899 4643 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 OR52I2-201ENST00000312614 1115 ntAPPRIS P2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 SALL4-202ENST00000371539 1151 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC10.18□□□□□ -0.78
SLC1A1P43005 ALKAL2-203ENST00000401503 748 ntTSL 2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 CES5AP1-202ENST00000415114 974 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC073873.1-201ENST00000433950 276 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 ZNF35-206ENST00000453164 581 ntTSL 3 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 RN7SL762P-201ENST00000469864 289 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 LGI1-204ENST00000478763 600 ntTSL 2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC097460.1-202ENST00000507494 769 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC025578.1-201ENST00000552027 543 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC008753.2-201ENST00000597420 387 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC10.18□□□□□ -0.78
SLC1A1P43005 IK-211ENST00000610522 737 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC011468.5-201ENST00000614138 748 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 AC027348.1-201ENST00000615979 615 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC012186.3-201ENST00000623850 485 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 AL583859.3-201ENST00000623982 1068 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 AC233300.1-201ENST00000624323 817 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 AC007241.1-201ENST00000634531 933 ntBASIC10.18□□□□□ -0.78
SLC1A1P43005 PIGA-209ENST00000634582 965 ntTSL 2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 AC137936.1-201ENST00000636316 845 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 OR52I2-202ENST00000641486 1115 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
SLC1A1P43005 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.18□□□□□ -0.78
SLC1A1P43005 INTS12-201ENST00000340139 1710 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SLC1A1P43005 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 LINC01266-201ENST00000420823 3948 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 IPO5P1-201ENST00000593576 2887 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 CCDC181-202ENST00000367806 1860 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 TRIM6-208ENST00000506134 1398 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC090525.2-201ENST00000551685 2270 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC079062.1-202ENST00000581011 2636 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
SLC1A1P43005 SNORA71E-201ENST00000365032 132 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 DYNLT1-203ENST00000367089 726 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 MIR646-201ENST00000385067 94 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 RBPMSLP-201ENST00000433427 502 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AL591644.1-201ENST00000436102 764 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 RPL5P26-201ENST00000438138 877 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 ZNF101P2-201ENST00000439152 1229 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AC246785.1-201ENST00000440916 264 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 MRPS16P2-201ENST00000445106 408 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AC107613.1-201ENST00000450488 1018 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AC139887.1-201ENST00000454037 286 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 RN7SL310P-201ENST00000465317 281 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 LINC02065-201ENST00000509924 562 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC10.17□□□□□ -0.78
SLC1A1P43005 IGLVI-56-201ENST00000521342 342 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 RPL17-207ENST00000580210 705 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 BOD1P1-201ENST00000584421 436 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms