Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AL137002.1-201ENST00000600642 182 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 GNAL-210ENST00000602628 1038 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC004840.2-201ENST00000603368 285 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AL132821.1-201ENST00000616029 394 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 FTX_5.1-201ENST00000618701 218 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 NPIPB2-207ENST00000620285 1216 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AL121955.1-201ENST00000620852 303 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC091953.1-201ENST00000624775 296 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 IPO4-221ENST00000625289 297 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 LINC02193-203ENST00000568418 2056 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 NRF1-203ENST00000353868 3568 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 PAXBP1-AS1-201ENST00000440052 3523 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TLR9-201ENST00000360658 3870 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC108062.1-203ENST00000511497 2012 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 GLDC-211ENST00000639318 2009 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 GRHL3-204ENST00000361548 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 PLA2G4E-201ENST00000399518 5266 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 KCNB2-201ENST00000523207 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 LINC00665-208ENST00000591372 2732 ntTSL 2 BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 EIF4BP3-201ENST00000432132 1850 ntBASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 PARD3B-203ENST00000358768 3432 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 AC013652.1-201ENST00000560197 1378 ntTSL 5 BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 AC103764.1-201ENST00000505083 2096 ntTSL 2 BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 KCNJ3-201ENST00000295101 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 TMEM169-205ENST00000454545 3460 ntAPPRIS P1 TSL 4 BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 COL6A3-205ENST00000392004 4037 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
SYCE2Q6PIF2 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 DNTT-201ENST00000371174 1972 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 WASHC2A-204ENST00000399339 4323 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 DMRTC1B-202ENST00000373532 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 U3.16-201ENST00000384391 209 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 KCNIP2-AS1-201ENST00000412353 850 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 HMGA1P6-201ENST00000418454 391 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 DSTNP1-201ENST00000419906 465 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 HSPB1P1-201ENST00000423240 256 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 APCDD1L-AS1-202ENST00000424205 581 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 PSMD10P1-201ENST00000436861 681 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 KCNH1-IT1-201ENST00000438597 626 ntTSL 3 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 LINC01054-201ENST00000446989 514 ntTSL 3 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 GCNT1P2-201ENST00000504682 595 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ADAM20P2-201ENST00000515830 1273 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 TBCA-208ENST00000520361 446 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 CARD8-224ENST00000522431 622 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 RPS3-207ENST00000526608 710 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AC105109.1-201ENST00000556012 1115 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AC005323.1-202ENST00000581947 578 ntTSL 4 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AL645949.1-202ENST00000600073 242 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AC092127.2-201ENST00000602862 601 ntTSL 3 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 GRIA3-206ENST00000616590 784 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AP001206.1-201ENST00000635554 720 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 LINC02211-202ENST00000641091 839 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 DLGAP1-AS5-202ENST00000565811 2594 ntTSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ABLIM3-205ENST00000504238 2774 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 CXCL12-203ENST00000374429 3532 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 SNX29P2-202ENST00000507381 1857 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 FLT1P1-201ENST00000451650 1320 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 GOSR2-218ENST00000638634 3446 ntTSL 5 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 BRD7P4-201ENST00000406170 1522 ntBASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 LRTOMT-202ENST00000307198 3604 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ZNF526-201ENST00000301215 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 LINC00635-202ENST00000464359 2119 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SYCE2Q6PIF2 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms