Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
BIVM-ERCC5R4GMW8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 AC116050.2-201ENST00000612102 1779 ntBASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 RN7SL471P-201ENST00000580476 299 ntBASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC34.91■■■■□ 3.18
BIVM-ERCC5R4GMW8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC34.9■■■■□ 3.18
BIVM-ERCC5R4GMW8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
BIVM-ERCC5R4GMW8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC34.89■■■■□ 3.18
BIVM-ERCC5R4GMW8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
BIVM-ERCC5R4GMW8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
BIVM-ERCC5R4GMW8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
BIVM-ERCC5R4GMW8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
BIVM-ERCC5R4GMW8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
BIVM-ERCC5R4GMW8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 SNORA78-201ENST00000459373 127 ntBASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
BIVM-ERCC5R4GMW8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 AC073912.3-201ENST00000624414 853 ntBASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC34.84■■■■□ 3.17
BIVM-ERCC5R4GMW8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 Z99916.2-201ENST00000604037 246 ntBASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 AC124016.1-201ENST00000609552 612 ntBASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
BIVM-ERCC5R4GMW8 AC133681.1-201ENST00000465482 601 ntBASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
BIVM-ERCC5R4GMW8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms