Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 AC007322.3-201ENST00000426526 701 ntBASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 RARRES2P4-201ENST00000514074 484 ntBASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DNMT3AQ9Y6K1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DNMT3AQ9Y6K1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DNMT3AQ9Y6K1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNMT3AQ9Y6K1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNMT3AQ9Y6K1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DNMT3AQ9Y6K1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 AL049796.1-201ENST00000565336 1766 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 GPX1P1-201ENST00000388829 606 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 AC083906.2-201ENST00000511578 360 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 AF201337.1-201ENST00000520239 748 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 AC100791.3-201ENST00000617619 330 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DNMT3AQ9Y6K1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.31■□□□□ 0.84
DNMT3AQ9Y6K1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 ID1-201ENST00000376105 1233 ntBASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 AC016405.3-201ENST00000607710 860 ntBASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DNMT3AQ9Y6K1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DNMT3AQ9Y6K1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms