Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
AP4B1Q9Y6B7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4B1Q9Y6B7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 AC105265.2-201ENST00000467189 838 ntBASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4B1Q9Y6B7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4B1Q9Y6B7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 IGHV3-19-201ENST00000521488 291 ntBASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4B1Q9Y6B7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 AL031602.1-201ENST00000633169 911 ntBASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms