Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 POU5F1P4-201ENST00000413175 1085 ntBASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB1Q9Y5F3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB1Q9Y5F3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB1Q9Y5F3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 MYCNOS-205ENST00000641950 531 ntBASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB1Q9Y5F3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 AC010141.2-201ENST00000452426 721 ntBASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 AC061975.6-201ENST00000579045 1553 ntBASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB1Q9Y5F3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 AC069152.1-201ENST00000438030 544 ntBASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 AP001160.3-201ENST00000601484 763 ntBASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB1Q9Y5F3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 AC098934.4-201ENST00000564127 592 ntBASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 AC120498.10-201ENST00000621827 505 ntBASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB1Q9Y5F3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms