Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF11Q9Y3C5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF11Q9Y3C5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 KRT87P-202ENST00000534226 1464 ntBASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF11Q9Y3C5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 AC006128.1-201ENST00000624704 1661 ntBASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RNF11Q9Y3C5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 AC121338.2-201ENST00000622535 1744 ntBASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF11Q9Y3C5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.14■□□□□ 0.82
RNF11Q9Y3C5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF11Q9Y3C5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 AP004607.4-201ENST00000530158 1459 ntBASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 LINC02228-203ENST00000641970 1355 ntBASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF11Q9Y3C5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF11Q9Y3C5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF11Q9Y3C5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms