Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 AC053503.5-201ENST00000601508 636 ntBASIC19.34■□□□□ 0.69
IFT52Q9Y366 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT52Q9Y366 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
IFT52Q9Y366 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT52Q9Y366 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT52Q9Y366 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.33■□□□□ 0.69
IFT52Q9Y366 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT52Q9Y366 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT52Q9Y366 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
IFT52Q9Y366 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
IFT52Q9Y366 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
IFT52Q9Y366 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.33■□□□□ 0.68
IFT52Q9Y366 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.33■□□□□ 0.68
IFT52Q9Y366 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.33■□□□□ 0.68
IFT52Q9Y366 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.33■□□□□ 0.68
IFT52Q9Y366 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFT52Q9Y366 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IFT52Q9Y366 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.32■□□□□ 0.68
IFT52Q9Y366 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 EEF1DP3-203ENST00000566025 782 ntBASIC19.32■□□□□ 0.68
IFT52Q9Y366 TPRG1LP1-201ENST00000598702 760 ntBASIC19.32■□□□□ 0.68
IFT52Q9Y366 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
IFT52Q9Y366 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IFT52Q9Y366 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFT52Q9Y366 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.32■□□□□ 0.68
IFT52Q9Y366 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.31■□□□□ 0.68
IFT52Q9Y366 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFT52Q9Y366 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFT52Q9Y366 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.3■□□□□ 0.68
IFT52Q9Y366 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFT52Q9Y366 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.29■□□□□ 0.68
IFT52Q9Y366 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms