Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MRPS28Q9Y2Q9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 AC135279.3-201ENST00000610945 1311 ntBASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 AC008764.7-201ENST00000593779 1081 ntBASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.81■□□□□ 0.44
MRPS28Q9Y2Q9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 AC131212.1-201ENST00000613771 668 ntBASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 AC020907.5-201ENST00000624372 1936 ntBASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.8■□□□□ 0.44
MRPS28Q9Y2Q9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MRPS28Q9Y2Q9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 BX005040.4-201ENST00000637145 1518 ntBASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms