Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC116050.2-201ENST00000612102 1779 ntBASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDK11AQ9UQ88 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 POM121L13P-201ENST00000422362 380 ntBASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CDK11AQ9UQ88 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC32.21■■■□□ 2.75
CDK11AQ9UQ88 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 SPIB-206ENST00000596074 847 ntTSL 2 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDK11AQ9UQ88 C1orf229-201ENST00000623686 2258 ntBASIC32.2■■■□□ 2.74
CDK11AQ9UQ88 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CDK11AQ9UQ88 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 Z99916.2-201ENST00000604037 246 ntBASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CDK11AQ9UQ88 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
CDK11AQ9UQ88 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDK11AQ9UQ88 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 C2orf69P4-201ENST00000565394 541 ntBASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms